| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1512 |
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| Symbol | |
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| ID | 4077068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1618965 |
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| End bp | 1619996 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006825 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_613507 |
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| Protein GI | 99081353 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.542173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.606293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCAA TAATCCTCCA AATCCTGAAC GGGCTCGACA AGGGCTCGGC CTATGCGCTG
ATCGCGCTGG GTCTGACATT GATTTTCGGC ACGCTGGGCG TTGTAAACTT TGCCCATGGC
GCGCTGTTCA TGATTGGGGC CTTCTGTGCA GTGACGCTGT CGCGCATCCT GACGCTGAGC
CATACGATCA TTGATGAAAC CAAAACCGAC TTCCTCGGCA ATCCGCTGAA AGTTGAGGTG
CCTTATGTGC ACGACATCTT TGGCGTCGAG ATGGGGAATG CGATCATCGA CTGGTCGGTG
CCGCTGTCGG TGCTTTTTGC GATCCCGATC ATGATTGCCG TGGGCGTGAT CATGGAACGC
GGTCTCATCA AGCATTTCTA CAAGCGCCCC CACGCGGACC AGATCCTCGT GACCTTTGGT
CTGGCGATCG TTCTGCAGGA GGTGATCAAA TACTTTTACG GTGCCAACCC GATCCCGACC
CCGGCGCCCG AAGCCTTCAA AGGCTCGCTC GATTTCGGGG CTGCACTCGG CTTTGACCCC
AACCTCATCA TCTACCCCTA CTGGCGCATC ATCTACTTCT GCTTTGCAGC AGTAATCATT
GGCGGCGTCT TTGCCTTCCT GCAGTTCACA ACCTTCGGCA TGGTGGTGCG TGCAGGCATG
GCCGACCGCG AGACCGTGGG GCTACTGGGG ATCAACATCG ACCGCCGCTT TACCATCATC
TTTGGTGTGG CCGCCGCCGT CGCAGGGCTT GCCGGGGTGA TGTACACGCC GATCAACTCG
CCCAACTATC ACATGGGCAT GGACTTCCTC GTGCTGAGCT TTGTGGTGGT GGTTGTCGGC
GGCATGGGCT CCCTGCCCGG TGCGGTGCTG GCCGGCTTCC TTCTGGGCGT GCTCGAGAGC
TTTGCCTCCA TGCGCGAGGT CATCGACATC ATCCCGGGCA TCAACCAGGT CATCATCTAT
CTGGTCGCCA TCATCATTCT TCTCACCCGC CCCCGTGGAT TGATGGGCCG CAAAGGCGTG
ATGGAGGACT AA
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| Protein sequence | MDAIILQILN GLDKGSAYAL IALGLTLIFG TLGVVNFAHG ALFMIGAFCA VTLSRILTLS
HTIIDETKTD FLGNPLKVEV PYVHDIFGVE MGNAIIDWSV PLSVLFAIPI MIAVGVIMER
GLIKHFYKRP HADQILVTFG LAIVLQEVIK YFYGANPIPT PAPEAFKGSL DFGAALGFDP
NLIIYPYWRI IYFCFAAVII GGVFAFLQFT TFGMVVRAGM ADRETVGLLG INIDRRFTII
FGVAAAVAGL AGVMYTPINS PNYHMGMDFL VLSFVVVVVG GMGSLPGAVL AGFLLGVLES
FASMREVIDI IPGINQVIIY LVAIIILLTR PRGLMGRKGV MED
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