| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1511 |
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| Symbol | |
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| ID | 4077067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1617419 |
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| End bp | 1618765 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006824 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_613506 |
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| Protein GI | 99081352 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.565949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.673528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGT CAGACGTAAG CCGTCGCGGC CTGCTGAGAA CCGGTGCGGT CGCGGGTGCA
GGGCTCGCCA TGCCGACCAT CTTTACGGCC CAAAGCGCGC ATGCATTCAC CAACAACCCC
ACTGGCGGCA CTGTTACACT CGGCTTTAAC GTCCCGCAGA CCGGCCCTTA CGCCGATGAA
GGTGCGGACG AGTTGCGCGC CTATGAGCTG GCGGTCGAGC ACCTGAACGG CGGTGGCGAT
GGCGGCATGC TCACCACCTT CAGCTCCAAG GCTCTGCAGG GCAATGGCAT CCTGGGCAAG
AAAGTCGAAT ATGTCACCGG CGATACCCAG ACCAAATCCG ATGCGGCGCG CGCTTCTGCC
AAGTCCATGA TCGAAAAAGA CGGTGCGATC ATGATCACGG GCGGCTCGTC TTCGGGTGTG
GCTGTGGCCG TGCAGGCGCT CTGCCAAGAG GCAGGCGTAA TCTTTATGGC GGGTCTTACC
CACTCCAATG ACACCACAGG CAAAGACAAG CGGGCCAATG GTTTCCGCCA CTTCTTCAAC
TCTTACATGT CTGGTGCGGC GCTGGCGCCG GTGCTGGCGA ATGCCTACGG CACCGACCGT
AAGGCCTATC ACCTGACCGC CGACTACAAC TGGGGCTATA CCACCGAAGA AGCAGTCCGG
TCCTCCACCG AAGCGATGGG CTGGGAAACC GTGGCTGCGG TGAAAACACC GCTAACCCAG
ACCGACTTCT CGTCCTATAT CGCCCCGGTT CTGCAGTCCG GTGCCGACAC GCTGGTTCTG
AACCACTACG GCGGCAACAT GGTGAACTCT CTCACCAACG CGGTGCAGTT CGGCCTGCGC
GACAAGCAGG TGAACGGCAA GGACTTCCAG ATCGTTGTTC CGCTCTACTC CCGCCTGATG
GCGAAAGGTG CGGGCGCCAA CGTGAAGGGC ATCTTCGGCT CCACCAACTG GCACTGGTCG
CTGCAGGACG AAGGTTCCAA GGCCTTTGTA CGCTCCTTCG GCACCAAATA CGGCTTCCCG
CCGAGCCAGG CCGCTCACAC CTGCTATGTG CAGACCCTGC TCTATGCAGA CGCGGTTGAA
CGCGCTGGCT CCTTTGCGCC CTGCGCCGTG GCAGAAGCGC TCGAGGACTA TGAGTTCGAC
GGTCTGGGCA ACGGCAAGAC GCTCTATCGT GGCGCCGATC ACCAGTGCTT CAAGGACGTG
CTGGTTGTGA AAGGGAAAGA GAACCCGACC TCGGAGTTCG ACCTTCTCGA AATCGTCGAA
GTCACCCCGG TTGGCCAGGT CACCTATGAC CCGAACCACC CGCAGTTCCA GGGCGGTGCG
CTCGGCACCT GCAACAACGG CGCCTAA
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| Protein sequence | MSKSDVSRRG LLRTGAVAGA GLAMPTIFTA QSAHAFTNNP TGGTVTLGFN VPQTGPYADE
GADELRAYEL AVEHLNGGGD GGMLTTFSSK ALQGNGILGK KVEYVTGDTQ TKSDAARASA
KSMIEKDGAI MITGGSSSGV AVAVQALCQE AGVIFMAGLT HSNDTTGKDK RANGFRHFFN
SYMSGAALAP VLANAYGTDR KAYHLTADYN WGYTTEEAVR SSTEAMGWET VAAVKTPLTQ
TDFSSYIAPV LQSGADTLVL NHYGGNMVNS LTNAVQFGLR DKQVNGKDFQ IVVPLYSRLM
AKGAGANVKG IFGSTNWHWS LQDEGSKAFV RSFGTKYGFP PSQAAHTCYV QTLLYADAVE
RAGSFAPCAV AEALEDYEFD GLGNGKTLYR GADHQCFKDV LVVKGKENPT SEFDLLEIVE
VTPVGQVTYD PNHPQFQGGA LGTCNNGA
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