| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1493 |
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| Symbol | |
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| ID | 4077049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1598143 |
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| End bp | 1599129 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006806 |
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| Product | ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_613488 |
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| Protein GI | 99081334 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.140791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACG TGCTAACAGC CGCCGCCATG GCACTGATGG CAACCTCTGC TGCGCAGGCC
GCAGATGAGG TGAAGCTGCA ACTGAAATGG GTCACCCAGG CGCAGTTTGC AGGCTACTAT
GTGGCGCTGG ACAAAGGGTT TTACGGGGAA GAAGAGCTGG ATGTGACCAT TCTTCCCGGT
GGCCCCGACA TCGCGCCCAC GCAGGTGATC GCAGGGGGCG GCGCGGATGT GACCGTGGAA
TGGATGCCCG CAGCTCTGGC TGCGCGGGAA AAGGGGCTGC CGCTGGTCAA CATTGCCCAG
CCGTTCAAAT CTTCTGGCAT GATGCTCACC TGCTGGAAAG ACACCGGCAT CTCTGCACCC
AAGGATCTCG CGGATCGCAC TCTTGGGGTC TGGTTCTTCG GCAATGAGTT CCCCTTCATG
AGCTGGATGG GCAAGCTCGG TATCTCGACA GAGGGCAAGG GTCCCGAAGG CGTAGAGGTT
TTGAAACAGG GCTTTAACGT CGATCCTCTG CTGCAGCGGC AGGCCGATTG CATCTCCACC
ATGACCTATA ACGAATATTG GCAGGTGATT GATGCGGGGG TCTCGGCTGA TGAGCTTGTG
ACCTTCAAAT ACGAGGACCA AGGCGTCGCA ACGCTCGAGG ATGGCCTCTA TGTGCTCGAG
GACAACCTCT CCGATCCGGC CTTCGTCGAC AAAATGGAGC GCTTTGTCCG AGCGTCTATG
AAGGGTTGGA AATACGCCGA AGAGAACCCG GAGGAGGCCG CAGAAATCGT GCTCGACAAT
GATGCCTCTG GTGCCCAGAC CGAAACCCAC CAAAAGCGGA TGATGGGCGA GATTGCCAAA
CTCACTTCCG GCAGCAATGG CGCGCTTGAC GTGGCAGACT ACGAGCGCAC GGTGCAGACC
CTGCTGAGCG GCGGCTCTGA CCCGGTCATC ACCAAGGCGC CTGAAGGGGC GTGGACCCAT
GCGATCACCG ATGCGGCGCT GAACTGA
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| Protein sequence | MKNVLTAAAM ALMATSAAQA ADEVKLQLKW VTQAQFAGYY VALDKGFYGE EELDVTILPG
GPDIAPTQVI AGGGADVTVE WMPAALAARE KGLPLVNIAQ PFKSSGMMLT CWKDTGISAP
KDLADRTLGV WFFGNEFPFM SWMGKLGIST EGKGPEGVEV LKQGFNVDPL LQRQADCIST
MTYNEYWQVI DAGVSADELV TFKYEDQGVA TLEDGLYVLE DNLSDPAFVD KMERFVRASM
KGWKYAEENP EEAAEIVLDN DASGAQTETH QKRMMGEIAK LTSGSNGALD VADYERTVQT
LLSGGSDPVI TKAPEGAWTH AITDAALN
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