| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1467 |
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| Symbol | |
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| ID | 4077764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1567246 |
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| End bp | 1569153 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638006778 |
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| Product | hypothetical protein |
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| Protein accession | YP_613462 |
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| Protein GI | 99081308 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2898] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGC GGGCCAGACG CAAGCAGACC TTTGCGAATT CCCTGAGGGT GGTGACGCCC
CTGCTCATTA TGGCGGGCTG TTTGTTCGCC CTGACCCGAC AAGCGGATCT GCCGCATTTC
CACGACCTTC TGGGCCTGCT CACGCAGGTG CCCGCGCCGC ATTGGATCGG CGCCCTCGGG
GCAACTGTGC TCAGTTTCTG GGCTCTTGGC CGCTATGACG CGGTCGCACA CCGGCATTTG
CGCAGCGGAA TCGATGACCG GACCGCACGG CGCGCGGGCA TGGCCGCTAT CGCCTTTTCG
CAGGCCGTTG GATTTGGCTT GTTTTCGGGG TCCTTTGCAC GTTGGCGCCT GCTGCCGCAA
CTGAATCCAT TGCTTTCGGC GCAGCTGACC GGGTTTGTGG GCATCACCTT CATGACAGCC
CTCGCTGTCA TTTGCGGGAT CTTTCTGATC CTTGTGGGAC CTTCATGGGG GATGCGCCTT
GTGGGCGGGG GCATCCTGTT TGCCGCGATC GCCGCTGTTG GCCTGTGCTT CTTGCACCCA
GAGTGGCGCA TCCGTGGTTT GCGGCTCCGG TTCCCTTCTG TGCAGGCCAT CCTTGCGCTG
GCGCTTTGGA CCATGATGGA TGTGACCTTT GCCGGGGTCG CCCTCTGGCT GTTGCTGCCG
GTTGGACATG GCATCGGCCT TGATGTCTTG CTGACCGCCT ATTTTCTGGC CCTTGGACTG
GCGATCATCT CCTCCTCTCC GGGCGGAGCC GGGCCGCTGG AACTTGCAAT GCTCACGCTT
CTGCCCGGTG CCGATCCCGC GACGCTGGTG GCAGGACTTC TCGCCTTTCG GGCAGTTTAT
TATGCGCTGC CCGCGATGCT TGCGGGTGCT GTGTTGCTCT GGCCACGGCT GCTGCGCCAC
GGAAAGGCAA TGCCGGACCC CTGGGAGACT GGCGATCTGG GCTGCGATCT GCGGCCTGCT
GCCAGCCAGC CCTTCGTCCG CCCGCAGGCC GAAACGGCCG TGCTCTTGCA AAACGGCGGC
CATGTGATGG CCTTTGGGCT CAATCAAGTG GCGCTCCTTG ATAGCCCGCA GCTCTCTGCG
GTGCTATTTG ATCCAATCAG CGGCCGACAA GACGAGATCC CCGCCGCCCT GCGCGCCCAT
GCACTCTCGC GCAATGCGGC AGCTTGCTTT TACAAATGCA GTGCCCGCAC CGCGCTGGCA
GCCCGTCAGG AGGGTTGGAA GATCCTGAGA GTGGCTCAGG ACGCCATCCT TGCGCCGGAG
ACCTTCACCG TCGAGGGCTC CAAGCATCGC CAACTGCGTC GCAAACTGCG CCACGCCGAG
AAGGCCGGAC TGCAGGTGGA GCCCGCCTGG GGGACGCTGC CCTTGACCCA GATGGCCCAG
GTTGATGCCG CATGGACGCG CCAGCACGGC GGTGCCCGTG GCACGACGAT GGGCCAGTTC
GAGCCGGGAT ATGTGGCGAT CCAGATGACC TGTCTTGCCT GGCTTGAGGA CCGCCTTGTC
GGCTTCATGA CCTTTCACCG GGCGGCGGAT GAATGGTGCC TTGATCTGGT GCGCCAATTG
CCCGGGGCGC CCGATGGCAC CGCCCATGCT ATGATTTGCA CCGCGGTCGA GGCCGCGCGC
GATGCGGGCG TGCGCCGCCT GTCGCTTGCG TCGGTTCCCG ATCACCGCTT CAGCGCGCGC
TTTGATGGCG GCCTGCGTCA GTTCAAGTCC TGCTTTGCCC CCACCTGGGA GGCCCGATAC
ATGGCGGCGC CAAGCTGGGC TCAGATGGGG CTCGCGATTG CCGAAATGAC CCGGCTGGTG
CATCGTCCGG CGCGTCCGGA GGCTGCAATG GCGCAGATCG ACATGCTGCA GGACCCTATT
CCTGATGATA CTGTCGAAAA TGCAGTTGCG GCAAAACGGA CCGCGTGA
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| Protein sequence | MPMRARRKQT FANSLRVVTP LLIMAGCLFA LTRQADLPHF HDLLGLLTQV PAPHWIGALG
ATVLSFWALG RYDAVAHRHL RSGIDDRTAR RAGMAAIAFS QAVGFGLFSG SFARWRLLPQ
LNPLLSAQLT GFVGITFMTA LAVICGIFLI LVGPSWGMRL VGGGILFAAI AAVGLCFLHP
EWRIRGLRLR FPSVQAILAL ALWTMMDVTF AGVALWLLLP VGHGIGLDVL LTAYFLALGL
AIISSSPGGA GPLELAMLTL LPGADPATLV AGLLAFRAVY YALPAMLAGA VLLWPRLLRH
GKAMPDPWET GDLGCDLRPA ASQPFVRPQA ETAVLLQNGG HVMAFGLNQV ALLDSPQLSA
VLFDPISGRQ DEIPAALRAH ALSRNAAACF YKCSARTALA ARQEGWKILR VAQDAILAPE
TFTVEGSKHR QLRRKLRHAE KAGLQVEPAW GTLPLTQMAQ VDAAWTRQHG GARGTTMGQF
EPGYVAIQMT CLAWLEDRLV GFMTFHRAAD EWCLDLVRQL PGAPDGTAHA MICTAVEAAR
DAGVRRLSLA SVPDHRFSAR FDGGLRQFKS CFAPTWEARY MAAPSWAQMG LAIAEMTRLV
HRPARPEAAM AQIDMLQDPI PDDTVENAVA AKRTA
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