Gene TM1040_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1466 
Symbol 
ID4077763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1566817 
End bp1567134 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content59% 
IMG OID638006777 
Producthypothetical protein 
Protein accessionYP_613461 
Protein GI99081307 
COG category[S] Function unknown 
COG ID[COG5467] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAT TTGATGACCG CGAGAAGGCA TTCGAAAACA AGTTTGCGCA TGACGCTGAA 
CTGAAGTTCC GCGCAACCGC GCGCCGCAAC AAGCTGCTGG GCCTTTGGGC CGCGGATCTG
TTGGGGCACA GGGACGAAGC GGCAGAAGCC TATGCCCAGA CCGTCATTAT CGCCGACCTG
GATGAACCGG GCGACGACGA TGTCCTCGCC AAGCTCGCCA CCGACCTCGA AGGCATGGTC
GAACGCGCAG CCATCCGGGA CAAGATGATG GAGCTGATGA TGCAGGTGGC AGAAGACCTC
CCCCAAACCG ATACCTGA
 
Protein sequence
MTTFDDREKA FENKFAHDAE LKFRATARRN KLLGLWAADL LGHRDEAAEA YAQTVIIADL 
DEPGDDDVLA KLATDLEGMV ERAAIRDKMM ELMMQVAEDL PQTDT