| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1441 |
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| Symbol | |
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| ID | 4078071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1538768 |
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| End bp | 1540192 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006752 |
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| Product | deoxyribodipyrimidine photo-lyase type I |
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| Protein accession | YP_613436 |
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| Protein GI | 99081282 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.511514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.115222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACA CCCGACCGGT GATCTGGTGG ATTCGGCGCG ACCTGCGCCT GCGCGACAAT
CCAGCCCTCA GGGCCGCGCA GGAGGCGGGC GGACCGATTA TCCCGCTCTA TATCCATGAC
GCGCAAGAAG AGGCCCTCGG GGCCGCGCCA AAGTTCCGCC TTGGCCTCGG GCTTGAACGG
TTTGCCAAAA CGCTCGAGGA GAAAGGCAGC CGTCTCATCG TCCGCCGTGG CGACGCACTC
GAGGTGCTGC GCGAGGTCAT CGCGGAGAGC GGCGCCGGAC ATGTGATCTG GTCGCGGCTC
TACGATCCGG CGGCCACAAA ACGTGACGCA AAGATCAAGG AAGCACTCAA AGCGTCTGAT
ATAAAGGCAA AATCCACGGG TGGGCGGCTG CTATTCGAAC CTTGGACCGT CGACACCAAG
GACGGCGGCA TGTACCGGGT ATATACGCCG TTCTGGAAGG CAGTCCGTAC GCGCGATGTC
GCGGAGCTGA CTGCCGCCCC CTCCCGGTTG GCCGCGCCCG AGAGTTGGCC GTCAGGTGAA
GCGCTCGCGG ATCTTGGCAT GGATGCCGCA ATGCGTCGGG GTGGCGCGAT TGTTGCGCAA
CATTGCCGTG TGGGAGAGGA CGCAGCCCTC GCGCAACTGG ATGATTTCCT GACGGAACGG
GTTTCGAACT ACAAAGCCCA TCGGGATTTT CCCGCCCGTG CTGCCACCTC GGAGCTTTCG
GAAAATCTCG CCTGGGGGGA AATCAGCCCA CATCGGATGT GGCATCTGGG CGCGCAGGCG
ATGCAGGACG GCCAGCCCGG CGCGGAGCAT TTCCTCAAAG AGGTTGTCTG GCGCGAGTTT
GCCTATCACC TGATGCATCG CTCGCCACGC ATCCTGACGC GAAACTGGCG AGAGGAATGG
GACGGTTTCC CCTGGCAGGA CGACCCTGGC GACGCTTTGC AGCGCTGGCA ACAGGGACAG
ACCGGCTATG ATTTTGTCGA TGCCGCGATG CGAGAGCTCT ACGTCACCGG CAAGATGCAC
AACCGCGCTC GGATGATCGT GGCAAGCTTT CTTACCAAGC ATCTGATGAT CCATTGGAAA
TACGGATTGC AGTGGTTCGA GGACTGTCTT GTCGACTGGG ATCCCGCTTC GAACGCGATG
GGCTGGCAGT GGGTGGCGGG TTCCGGTCCT GATGCGGCGC CCTTTTTTCG CATTTTCAAC
CCGGATGGTC AGCTCGAGAA GTTCGACCCC AAGGGAGACT ATGCGCGTCG GTGGCTGCCC
GAAGGCCAGG CCAACCCGCC CGAAACCGCG ATGGCATACT TTGAGGCGAT CCCGCGCAGG
TGGTCGCTTC ATCCCGACCA GTCGCGTGTT TCACCGATTA TCGGTTTGAA AGAGGGCCGC
GAGCGCGCGC TTTCTGCCTA CAAAGAAAGC CGCAATCAGA GCTGA
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| Protein sequence | MADTRPVIWW IRRDLRLRDN PALRAAQEAG GPIIPLYIHD AQEEALGAAP KFRLGLGLER
FAKTLEEKGS RLIVRRGDAL EVLREVIAES GAGHVIWSRL YDPAATKRDA KIKEALKASD
IKAKSTGGRL LFEPWTVDTK DGGMYRVYTP FWKAVRTRDV AELTAAPSRL AAPESWPSGE
ALADLGMDAA MRRGGAIVAQ HCRVGEDAAL AQLDDFLTER VSNYKAHRDF PARAATSELS
ENLAWGEISP HRMWHLGAQA MQDGQPGAEH FLKEVVWREF AYHLMHRSPR ILTRNWREEW
DGFPWQDDPG DALQRWQQGQ TGYDFVDAAM RELYVTGKMH NRARMIVASF LTKHLMIHWK
YGLQWFEDCL VDWDPASNAM GWQWVAGSGP DAAPFFRIFN PDGQLEKFDP KGDYARRWLP
EGQANPPETA MAYFEAIPRR WSLHPDQSRV SPIIGLKEGR ERALSAYKES RNQS
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