Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1433 |
Symbol | |
ID | 4078063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1530278 |
End bp | 1530904 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638006743 |
Product | hypothetical protein |
Protein accession | YP_613428 |
Protein GI | 99081274 |
COG category | [R] General function prediction only |
COG ID | [COG2068] Uncharacterized MobA-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.238729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.170444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCTG GCCCGTCACA ACATATGCCG AAATTGGCCA TTCTCCTGCT GGCGGCGGGC GCATCGTCAC GAATGCGCGG GCGTGACAAA TTGTTGGAAC AGGTGAACGG CCGCCCCCTG GTTGCGGGGC TGAGCGATGC GGCGCGCGCA TCGGGATGTG AGGTCTATGT GACTGTGCCG CATCTCGAAC ACCCGCGCGC CAGTGCTGCG GGCGAGGCTC ATCTGGTTGC GGTTCCGAAT GCGGTCGAAG GATTGAGTGC CTCGCTCCGC GCGGGCATCA CCGCTCTGGC GGGCGATATC GACGGTGTCA TGGTGTTGCC AGCCGACATG CCCGAAATCA CTGCTGCGGA TTTCCTGAAA ATGGCAGAGC AATTTGCCGG TCCAGAGGGG GCTATTCTAC GTGCAAGCGG CACAGATCAA AGCGGCGCTC GCCGAGCAGG TCACCCCGTG CTGTTTCCAC GCCGATGCTT TGATGCGCTG CAAACGCTCA CGGGCGATGC GGGCGCGCGG GAACTTCTCA AACAGGAGGC GGTGCAGTTG ATCGCGCTGC CGGGCGCGCA TGCGCTCACG GATCTGGACA CGCCCGAAGA CTGGACCAAG TGGCGCGCGC GCCAAGGTGA CGTCTGA
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Protein sequence | MNAGPSQHMP KLAILLLAAG ASSRMRGRDK LLEQVNGRPL VAGLSDAARA SGCEVYVTVP HLEHPRASAA GEAHLVAVPN AVEGLSASLR AGITALAGDI DGVMVLPADM PEITAADFLK MAEQFAGPEG AILRASGTDQ SGARRAGHPV LFPRRCFDAL QTLTGDAGAR ELLKQEAVQL IALPGAHALT DLDTPEDWTK WRARQGDV
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