| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1421 |
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| Symbol | |
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| ID | 4078051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1516976 |
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| End bp | 1518391 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006731 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_613416 |
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| Protein GI | 99081262 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0844206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0579144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTAG AAAACAGCCA TACTCCCGAT GCCTTGGCTG AGGCATTTGC AACCGTCGAC
GGTCTTATGG CCACGGGCAA ATTTGCACGC TCTCTCAGCG TGATGCTGCC TTTTGTTCAA
ACAGGTGAGC TGGATGCTGG CCTGCTGGAT CGCACCGCCG ATTGCTTCTT TGAAATGCGT
GACTACGAGA ATGCGGTAAA CGTCATGCGC CATGTCACTG CAACCTGGCC CGATGATCCC
TCCGCATGGG GCAAGCTTGG CCTGATGCTG CAAACCAAGG GTGATCTCCT TGGTGCCGAG
CAGGCCTTTG AGGAAGTGCT GAAGCGCGAT CCCAATTCGA TCCCGGCGCT GACTGCGCTC
AACGGGATTG AGACATTTTC CGTCGACAGC CTCTATGCCC AGCGCCTGAT GTCGCTCTCC
GAGCGTGAGG ATCTGGATGC CAAACACCGT GCCTTGATCC ACTATGCGCT GGCCCAGATC
GCCCATGGGT CGGGCGAGGC AGAGGTCGCA TTTACGCTGT TCCAATCTGC GCGCAACGAG
GTGGCCGGTC CTTTTGCGCC TGCGATTTTC GACGAGATGG TCGCCGAGCA AGAAGCCTTG
TTTGAACCGC GCCCGGCCTC TGAGGATGCG TCGCTGCTGC CCAAACTGGT CTTTATCGGC
GGTATGCCGA TGTCTGGCAC CGGTCTGGTG GATCGAATTC TCGCACAGCA CCCTGGCGTG
TTCAGTGTTG GCGCAAAAAC GGCGCTCTCG CGCACCCATG GTGCCATCCG CATGCATCTC
GCCAAGACCG ACCGTCCCTG CAACTACTGG GATTGGATGG AGCATCTGAG CGCAGAAGAA
ATCGACATCT TCCGTCAGTA CTACCTCGAG CGCGCCCTCG GCGGTCAGGT GGCTGGTGGC
AAGACCATTG TTGACGCGCA TCCGCTGGGA TGTCTGGAAT TCGGCCTTGC ACAATTCCTC
TTCCCCGAGG CCAAATTTGT CTTCATGTCG CGTCACCCGA TGGACACGGC GCTGGCCAAT
ATCGCGTCCA ACGTGCTGAA CGGCAATGCG CTGGCATCGC GTACCGAATG GATCGCGCAG
GTGATGCGCA CGGTCTATTC CTCGGCAACC GTCTATGCTT CCAAACTTGG CGACAGCATG
CGCCTGCAGT CCTACGAGGC GCTGGTGCAA AACTCCGAGC GTGAAATCGG CCTCCTCTTG
GAGCATGCGG GTCTTGAATA CAACGCCGCA TGCCTCACAC CAAATGCGCT CTGTGACGTG
CCGCAGATTG CGACCATGCT TGGTCAGGAA GAGCTCTCGA CTGAGACGCA GAACCAGTGG
CTCCCCTATG AGGAGCAGCT GCAGGGGTTC TACGAGCAAC TGGGCGGCGA ACGCTGGGTC
TCTGCTTGGG AAGATTTCGA CAAGACGCTG CGCTGA
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| Protein sequence | MLVENSHTPD ALAEAFATVD GLMATGKFAR SLSVMLPFVQ TGELDAGLLD RTADCFFEMR
DYENAVNVMR HVTATWPDDP SAWGKLGLML QTKGDLLGAE QAFEEVLKRD PNSIPALTAL
NGIETFSVDS LYAQRLMSLS EREDLDAKHR ALIHYALAQI AHGSGEAEVA FTLFQSARNE
VAGPFAPAIF DEMVAEQEAL FEPRPASEDA SLLPKLVFIG GMPMSGTGLV DRILAQHPGV
FSVGAKTALS RTHGAIRMHL AKTDRPCNYW DWMEHLSAEE IDIFRQYYLE RALGGQVAGG
KTIVDAHPLG CLEFGLAQFL FPEAKFVFMS RHPMDTALAN IASNVLNGNA LASRTEWIAQ
VMRTVYSSAT VYASKLGDSM RLQSYEALVQ NSEREIGLLL EHAGLEYNAA CLTPNALCDV
PQIATMLGQE ELSTETQNQW LPYEEQLQGF YEQLGGERWV SAWEDFDKTL R
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