| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1416 |
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| Symbol | |
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| ID | 4078046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1509244 |
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| End bp | 1510074 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006726 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_613411 |
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| Protein GI | 99081257 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.813304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.204601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTG ACCCCAAGAT CCGTGGACCG CTGGACGTAC GACCGCTTTT GCAGCTGATG
TCCGCAGGGT CCTGGCAGGT TGAATTGGCC CACGAGCGCG ACTGCCATCT GGTGATCTGG
ATCACCCGCG GTCAAGGCCG CGTGTTGTTG GATGGGCAGT GTCGCGGCTT TGGTCCTCAT
ACGGCCCTGT GCATACCAGC GCGAACATTG TTCTCGCTCG AGTTGGGCCG ACAATGCATT
GGGCAAGTCC TGCGCATCGG CGAAGACATC CCCTGCGGCC TTCCTGAAAC CCCGATGCAG
ATCCGCATAA ACGACATGCA GGAGCAGGGG CGGATCAATG CGCTCTTTGA CGCGGCCTTG
CGCGAGCAGC AGGTCGCGGA TGACCACACC GCCAAAGCTA TCACGAGCTA TGCTGATCTG
GTGGGCATCC ACCTGCAACG GCTTTGGGTC AGAGCGCCCG AGAACCGAAA ACCCACGGCC
GCGCGCAGGC TCTGCCGCGC CTATTGTGCG CGGCTGGCGC AAGACGCCGA AGGGGCGTTT
AACATGGCGG GCCATGCGTC AGAGCTTGGC GTGACACCGA CGCATCTGAC ACGCGTTTGC
AAGCAGGAGA CCGGAAAGAC CGCCGCAGCG CTGCTCACCG AGCGGCAGTT ACACGCGGCG
CGGAGCCTCC TCGCCTCGAC ACGTTTGCCA ATGCGCGACA TTGCGCAAAG TCTCGGTTTC
GGAAGCGCCG CCTATTTCAC CCGTTTTATT ACCCAGCACA CGGGCAGCAC CCCAAGCGAT
CTGCGCAAGA AGGCACATGG CGCTCAGCTT GCCTCTGGTC GGAATCCCTG A
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| Protein sequence | MPFDPKIRGP LDVRPLLQLM SAGSWQVELA HERDCHLVIW ITRGQGRVLL DGQCRGFGPH
TALCIPARTL FSLELGRQCI GQVLRIGEDI PCGLPETPMQ IRINDMQEQG RINALFDAAL
REQQVADDHT AKAITSYADL VGIHLQRLWV RAPENRKPTA ARRLCRAYCA RLAQDAEGAF
NMAGHASELG VTPTHLTRVC KQETGKTAAA LLTERQLHAA RSLLASTRLP MRDIAQSLGF
GSAAYFTRFI TQHTGSTPSD LRKKAHGAQL ASGRNP
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