| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1412 |
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| Symbol | |
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| ID | 4078042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1505764 |
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| End bp | 1506534 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006722 |
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| Product | undecaprenyl pyrophosphate synthetase |
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| Protein accession | YP_613407 |
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| Protein GI | 99081253 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.904753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.207147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTCG TCACAGATAG CGCAACGCCG CGTGCGGCTG GTGCGGGAGA TCCTGCACCG
GGCGTTGGTG ACGGGCCGAA ACATGTAGCG ATCATCATGG ATGGCAACGG CCGCTGGGCG
CAGGCGCGCG GGCGGCCACG GCTGTTCGGG CATCATGCGG GCGCGCGGCG CGTGCGCGAA
GTGGTGGAAT GCTGTCCGTC GCTTGGGATC AAGTATCTCA CGATTTTTGC CTTCTCGACT
GAAAACTGGA AACGCACACA GGTCGAGGTC GCAGGCCTGA TGAGCTTGTT CCGGCGCTAT
ATCTCCAAGG AAATGAAGGC GCTGGCGGCA AAGAATGTGC GCGTTCGTTT CATCGGAGAC
CGCGTGCGGC TCGACACCAA ACTGGTGCAG CTGATGGATG CGCTCGAGCT CGAGACCGCA
GGCAATGACG GCACTCACCT CACCATTGCG CTGAATTACG GCGGGCGGGA TGAGGTGGCA
CGCGCAACTC AGCGTCTGGC ACAGGATGTT GCGGATGGGC GGCTGGACCC CAGGGACGTC
GATGAAGAAA CCCTGCCGCG CTATCTCGAC ACCCATGTGC TGCCGGATCC GGATCTGGTG
ATCCGTACCT CAGGTGAGGC GCGGATCTCG AATTTCTTGC TGTGGCAGTC CGCCTATTCT
GAATACGAGT TCATCGACAC GCTGTGGCCC GATTTTTCAT CCGAAGAACT GGCGCGCCTG
TGTCGTAACT TCGGCAATCG AGACAGACGG TTCGGGGCCA CCAAGAAATG A
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| Protein sequence | MSLVTDSATP RAAGAGDPAP GVGDGPKHVA IIMDGNGRWA QARGRPRLFG HHAGARRVRE
VVECCPSLGI KYLTIFAFST ENWKRTQVEV AGLMSLFRRY ISKEMKALAA KNVRVRFIGD
RVRLDTKLVQ LMDALELETA GNDGTHLTIA LNYGGRDEVA RATQRLAQDV ADGRLDPRDV
DEETLPRYLD THVLPDPDLV IRTSGEARIS NFLLWQSAYS EYEFIDTLWP DFSSEELARL
CRNFGNRDRR FGATKK
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