| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1402 |
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| Symbol | |
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| ID | 4075895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1495642 |
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| End bp | 1496802 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006712 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_613397 |
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| Protein GI | 99081243 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.873415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.256697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCCTCA GGGTGTTTGT CCTTGCGGGG GAGCCTTCGG GTGACCGCCT TGGCGCGGCG
CTCATGCGGG GCCTCAAAAC GCTCGCGCCC GACGTTTCCT TTGAAGGCGT CGGCGGCAGT
CTGATGCAGA CCGAGGGGCT GAAGTCGCAA TTTCCCATGG AAGAGCTGTC CGTGATGGGG
ATTGCCGAGG TCTTGCCGAA GTATTTCGAC CTCAAGCGCC GCATTCAGGA AACCGCCGAT
GCGGTGGTGG CGATGAAGCC TGACGTAATG ATCACCATCG ACAGCCCTGA TTTTTCTCTG
CGGGTGGCAA AGTTGGTGAA AGACGCCAGC GATATTCGAA CCGTTCATTA TGTTGCGCCC
TCCGTCTGGG CGTGGCGGCC GGGGCGCGCG ACAAAGATGG CGAAGGTCAT CGATCATGTG
CTGGCACTGT TGCCGTTCGA GCCGCCTTAT ATGGAAGCCG CCGGGATGGA GTGCGATTTT
GTCGGCCATC CGGTTGTGGC TGAGCCCAAG GCGAGCGAGG CGGAAATTGC AACGTTTCGC
GCGGCGTTTG ATCTGGGCGA TGCGCCCGTT CTCTTGGCGC TGCCGGGCTC GCGGCGGTCC
GAGGTGGAGC GCCTTGCTGA TGTGTTCGGT GCAGCACTTG CACAGTTCAA AGCCAAACAC
CCCGACCACC GGATCGTTGT CCCATCCGCA TCACATGTGG CGCCTATGGT GCGCGAGGCA
CTGGCGAATT GGCCTGCGGA CAGCCTCGTG CTGGATCCGG CGGATCATGC GCCCGCAGTG
TTTGCCGCGC ACAAGCGCGC AGCCTTTGCC ACTGCCGATC TGGCGCTGGC TGCGTCTGGG
ACTGTCTCGC TCGAATTGGC CGCGGCGCGT ACACCGATGG TGATTGCCTA TCGGTTCAAC
TGGCTCACCT GGCAGATCAT GAAGCGCATG GCGCTGATTG ATACGGTGAC ATTGGTCAAT
CTGGTGAGCG ACACCCGCGT GGTGCCGGAA TGCCTTGGTC CCAATTGCAC CGCCGAAACC
ATTGCGGCGC GTCTCGATCA GGTGTCGATG GCACCCGAGG CGCAGCAAGA TGCCATGCGC
CTCACGATGG AACGGGTGGG GGAAGGCGGT GAAGCGCCGG GTCTACGTGC CGCCCGCGCA
GTTCTCGCGC GGCTCCCATA A
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| Protein sequence | MGLRVFVLAG EPSGDRLGAA LMRGLKTLAP DVSFEGVGGS LMQTEGLKSQ FPMEELSVMG
IAEVLPKYFD LKRRIQETAD AVVAMKPDVM ITIDSPDFSL RVAKLVKDAS DIRTVHYVAP
SVWAWRPGRA TKMAKVIDHV LALLPFEPPY MEAAGMECDF VGHPVVAEPK ASEAEIATFR
AAFDLGDAPV LLALPGSRRS EVERLADVFG AALAQFKAKH PDHRIVVPSA SHVAPMVREA
LANWPADSLV LDPADHAPAV FAAHKRAAFA TADLALAASG TVSLELAAAR TPMVIAYRFN
WLTWQIMKRM ALIDTVTLVN LVSDTRVVPE CLGPNCTAET IAARLDQVSM APEAQQDAMR
LTMERVGEGG EAPGLRAARA VLARLP
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