| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1399 |
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| Symbol | |
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| ID | 4075892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1493148 |
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| End bp | 1493867 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638006709 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_613394 |
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| Protein GI | 99081240 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.365128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTC TTCTGGTCGA GGATGATCCC ACGACAGCGA AAAGCATCGA GCTGATGCTG
ACTCATGCGA ACCTGAACGT TTATACCACG GATCTTGGCG AAGAGGGCAT AGACCTGGCC
AAGCTCTATG ACTACGACCT GATCCTTCTG GATCTTGGTC TGCCGGATAT GAACGGCCAT
GAGGTTCTGC GTCAGCTGCG TTTGTCGCGT ATCGAGACCC CGATCCTGAT CCTCTCCGGT
GCTGATGACA CCGAGAACAA GATCAAAGGC TTTGGCTTTG GCGCGGATGA CTATCTGACC
AAACCCTTCC ATCGTGAAGA GCTGGTCGCC CGGATCCACG CGATCATTCG TCGCTCGAAA
GGGCATTCGC AGTCGATCAT CAAGACGGGC AAGATCTCGG TTAACCTTGA CGCCAAGACC
GTTGATGTCG AAGGGAAATC TGTGCATCTC ACTGGTAAGG AATACCAGAT GCTCGAGCTG
CTCTCGTTGC GCAAGGGCAC AACCCTGACC AAAGAGATGT TCCTGAACCA CCTCTATGGC
GGAATGGACG AGCCCGAGCT CAAGATTATC GACGTCTTTA TCTGCAAGCT GCGCAAAAAG
CTCAGCACAG CAACCGACGG CGAGAACTAT ATCGAAACCG TCTGGGGCCG TGGCTATGTG
CTGCGAGATC CGCAAGAAGA TCTCTCCGCT GGTGGGCCAC GCATGGCGGT CGGCGCCTGA
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| Protein sequence | MRILLVEDDP TTAKSIELML THANLNVYTT DLGEEGIDLA KLYDYDLILL DLGLPDMNGH
EVLRQLRLSR IETPILILSG ADDTENKIKG FGFGADDYLT KPFHREELVA RIHAIIRRSK
GHSQSIIKTG KISVNLDAKT VDVEGKSVHL TGKEYQMLEL LSLRKGTTLT KEMFLNHLYG
GMDEPELKII DVFICKLRKK LSTATDGENY IETVWGRGYV LRDPQEDLSA GGPRMAVGA
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