Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1390 |
Symbol | |
ID | 4075883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1483581 |
End bp | 1484003 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638006700 |
Product | phenylacetic acid degradation-related protein |
Protein accession | YP_613385 |
Protein GI | 99081231 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGG TGTTTGATAA AGACGGCCTC AGCGCCTATC TCGAGGAGGT CTTTCCTCAG ATACAGGGCG AGTTCAGCAT CGATGCGCTT GCAAAAGGCG AGATCACCAT GCGCCTCAAC GTGCAGGAGC GGCATTTGCG TCCGGGAGGA ACGGTTTCAG GCCCGTCGAT GTTCGCGCTC GCTGATGTCT CGGTCTACGC CTTGGTTTTG GCGCACCTCG GACGAGAGGC GCTGGCGGTC ACGACCAATG CCTCGCTCGA TTTTATGCGC AAACCCGAAA GCGGACGCGA TCTCTTGGGG CAAGCACGCC TGTTGAAACT GGGGCGCACA TTGGCAGTCG GGGATATCCT GTTGTTCTCC GAAGGGATGG AGGCCCCGGT CGCGCGCTCA ACCATGACCT ATTCCATCCC GCCGAAACGC TAA
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Protein sequence | MELVFDKDGL SAYLEEVFPQ IQGEFSIDAL AKGEITMRLN VQERHLRPGG TVSGPSMFAL ADVSVYALVL AHLGREALAV TTNASLDFMR KPESGRDLLG QARLLKLGRT LAVGDILLFS EGMEAPVARS TMTYSIPPKR
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