Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1382 |
Symbol | |
ID | 4075875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1476075 |
End bp | 1476692 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638006692 |
Product | TetR family transcriptional regulator |
Protein accession | YP_613377 |
Protein GI | 99081223 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAC GTGGCTATCA TCACGGTAAT CTCCGCCAGG CTCTGGTGGA ATCCGCCCTG CGCCTCATCG AGGTCAAGGG GCCGACGGGG TTTACGCTTT CGGAGGCCGC CAAACAGGCT GGCGTCACCC CGGCTGCCGT TTACCGCCAT TTCGAGGGGC GCGAAGATCT GATTGCAGAA GCCGCACGGC AGGGCTTTTT GATGTTTGCG GACTTGTTGC AGCACGCCTA TGATAAATAT CAGTCGTCTG CGCTGGCCGC GTTTGAAGCG ACCGGACGTG CCTATCTCGC CTTCGCGCGC AAACACCCCG GTCACTATAT CGCGATGTTT GAAAGCGGCA TTTCGGCCAA TCGCACGCCC GAGCTGGCAG AAGCCGCGAG CCGCGCGCGC GGAGTGCTCG AACAAGCCGC CGCCAAACTC AGCCAACATA TACCGGCCGA AAAACGCCCG CCTGCCTCCA TGTTCTCGGC CCATGTCATG GCCATGAGCC ACGGTGTCGT GGAACTTTAT GCGCGCAACG CGCCGGGCAC TGCCTCGCCT TATGCGCCAG AGGATCTCTT GGAGAGCGGC ATTGGCGTGT ACCTGCGGGG CCTTGGATTG ATTGATCCAG ATAGCTGA
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Protein sequence | MAKRGYHHGN LRQALVESAL RLIEVKGPTG FTLSEAAKQA GVTPAAVYRH FEGREDLIAE AARQGFLMFA DLLQHAYDKY QSSALAAFEA TGRAYLAFAR KHPGHYIAMF ESGISANRTP ELAEAASRAR GVLEQAAAKL SQHIPAEKRP PASMFSAHVM AMSHGVVELY ARNAPGTASP YAPEDLLESG IGVYLRGLGL IDPDS
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