Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1365 |
Symbol | |
ID | 4076382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1460047 |
End bp | 1460544 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638006675 |
Product | phosphatidylglycerophosphatase |
Protein accession | YP_613360 |
Protein GI | 99081206 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1267] Phosphatidylglycerophosphatase A and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.695464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.742084 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTTC CACAACTTCT CGGAACCTGT TGCGGAATAG GGTATTTTCG CCCTGCGCCC GGAACCTGGG GGTCACTGGC CGCGCTGCCG TTGACCTATG TGTTGCATGT CACGGGTGGC TTTCCTCTGC TCGCCGTTTT TACCGTGGCC TCTGTTCTTG TGGGCCTGTG GGCGGCCAAG GAAATGACCC GCGGCCAGGA AGATCTGGAC CCTTCGGAAT TCGTGCTGGA TGAGCTCGCG GGGCAGATGC TTGCGCTCTG GGCCATATCT CTGCCGGCCT GGTTGCATGG ACTGGAGATC ACCGCGCTCT GGCCCGGTTG GGTCGCAGGA TTTTTGCTGT TTCGGCTCTT TGATATCTGG AAGCCCGGGC CGGTGGGCTG GGCGGACCGC AAGAAAGGTC CCTTTGGCGT TGTCATGGAC GATGTCATAG CCGGTGGTAT GGCCGCGGTA GGGGTCGCGA TGCTTGCAGG CCTCTCCCAT GGGGTGCTTG GGCTATGA
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Protein sequence | MTLPQLLGTC CGIGYFRPAP GTWGSLAALP LTYVLHVTGG FPLLAVFTVA SVLVGLWAAK EMTRGQEDLD PSEFVLDELA GQMLALWAIS LPAWLHGLEI TALWPGWVAG FLLFRLFDIW KPGPVGWADR KKGPFGVVMD DVIAGGMAAV GVAMLAGLSH GVLGL
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