Gene TM1040_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1365 
Symbol 
ID4076382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1460047 
End bp1460544 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content61% 
IMG OID638006675 
Productphosphatidylglycerophosphatase 
Protein accessionYP_613360 
Protein GI99081206 
COG category[I] Lipid transport and metabolism 
COG ID[COG1267] Phosphatidylglycerophosphatase A and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.695464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.742084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTTC CACAACTTCT CGGAACCTGT TGCGGAATAG GGTATTTTCG CCCTGCGCCC 
GGAACCTGGG GGTCACTGGC CGCGCTGCCG TTGACCTATG TGTTGCATGT CACGGGTGGC
TTTCCTCTGC TCGCCGTTTT TACCGTGGCC TCTGTTCTTG TGGGCCTGTG GGCGGCCAAG
GAAATGACCC GCGGCCAGGA AGATCTGGAC CCTTCGGAAT TCGTGCTGGA TGAGCTCGCG
GGGCAGATGC TTGCGCTCTG GGCCATATCT CTGCCGGCCT GGTTGCATGG ACTGGAGATC
ACCGCGCTCT GGCCCGGTTG GGTCGCAGGA TTTTTGCTGT TTCGGCTCTT TGATATCTGG
AAGCCCGGGC CGGTGGGCTG GGCGGACCGC AAGAAAGGTC CCTTTGGCGT TGTCATGGAC
GATGTCATAG CCGGTGGTAT GGCCGCGGTA GGGGTCGCGA TGCTTGCAGG CCTCTCCCAT
GGGGTGCTTG GGCTATGA
 
Protein sequence
MTLPQLLGTC CGIGYFRPAP GTWGSLAALP LTYVLHVTGG FPLLAVFTVA SVLVGLWAAK 
EMTRGQEDLD PSEFVLDELA GQMLALWAIS LPAWLHGLEI TALWPGWVAG FLLFRLFDIW
KPGPVGWADR KKGPFGVVMD DVIAGGMAAV GVAMLAGLSH GVLGL