| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1348 |
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| Symbol | |
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| ID | 4075919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1436054 |
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| End bp | 1437277 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638006658 |
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| Product | major facilitator transporter |
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| Protein accession | YP_613343 |
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| Protein GI | 99081189 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAA AACGCAAAAA AGCCCTGCCA CAGGGCGAAT TCATTGCTCT GATCGCGATG
ATGTTTGCAA CCATCGCGTT CTCGATCGAC GCGATGCTGC CCGCACTTCC GGAAATCGGC
GCAAGTCTAA GCCCTGACGA TATAAATCAG GCTCAACTTA TTATTTCTTC CTTTGTTCTT
GGCATGGGGG TTGGCACCTT TTTTACCGGC CCCCTGTCAG ATGCCTTCGG GCGCAAGCCG
GTGATCTTTG TTGGCAGCGG TCTCTATTGC CTTGGCGCTC TGGCTTCGTT TTTCAGCCAG
TCTCTGGAGA CGATTTTGAT CTCGCGGCTG CTGATGGGGC TTGGGGCTGC TGGCCCACGG
GTGGTCGCGA TCGCGATTGT GCGCGACCTT TATGTCGGGC GCGACATGGC GCGCATCATA
TCGCTCGCGA TGATGATTTT TACGCTGGTG CCCGCCTTTG CGCCCCTGCT CGGAAGCGGC
ATCATTGCTG TCTCCAGCTG GCGCGGAATC TTTGTCGCCT TTGCGGTGTT TTCGCTGATC
ACCGTGCTCT GGATGAGCAT CCGTCTTGAG GAGCCCTTGC CCCGGGACAA GCGTCGGCCT
TTCCGGTTGC CGCAGCTCAT GGGCGCGCTT CGCGAGATGG TCAGCCATCC AACCGTACGT
CTCTCGATCA TGGCGCAGAC CTTTTGCATG TCGATGTTGT TCACTGTTAT CATAATGGTA
CAGCCCGTTT ATGATGTCGT GTTCGCACGC AGCGAGAGCT TTCCCTTCTG GTTCATGATG
GTCGCTCTGA TGGCCGGTAC CGCCAGCTTG TTGAATGCCT CTTTGGTGGG GCGCATTGGT
ATGCGGCGCA TGGTGACCTG GGCCCTGGGA GTTCAGATCC TCATCAGCAC AGGTGTCTTC
GCCCTGACCC AGCTCTCACT TGGCGAGCCG ACGAGCTTTT ACATTTTTGT CTTCTGGCAG
ACGAGCGTAT TCTTCATGGT AGGGCTCACC CTCGGAAATT TGAATGCCAT CGCCATGGAG
CCAATGGGGC ATATCGCTGG CATGGCAGCG TCCGTCATGG GCGCCCTTTC CACCGTGGCG
GCGGCAGTGA TTGCCGCGCC GATTGGCCTT CTGTTTGACG GCACGATCAT CCCGATGGTT
GGCGGTGTTC TTGCAACCGC TGGGCTGGCG TTCATCGTAA TGCTCTGGAT GGGGCGCGTT
GAGGCGGCAG CAACTCCCGC ATAA
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| Protein sequence | MIEKRKKALP QGEFIALIAM MFATIAFSID AMLPALPEIG ASLSPDDINQ AQLIISSFVL
GMGVGTFFTG PLSDAFGRKP VIFVGSGLYC LGALASFFSQ SLETILISRL LMGLGAAGPR
VVAIAIVRDL YVGRDMARII SLAMMIFTLV PAFAPLLGSG IIAVSSWRGI FVAFAVFSLI
TVLWMSIRLE EPLPRDKRRP FRLPQLMGAL REMVSHPTVR LSIMAQTFCM SMLFTVIIMV
QPVYDVVFAR SESFPFWFMM VALMAGTASL LNASLVGRIG MRRMVTWALG VQILISTGVF
ALTQLSLGEP TSFYIFVFWQ TSVFFMVGLT LGNLNAIAME PMGHIAGMAA SVMGALSTVA
AAVIAAPIGL LFDGTIIPMV GGVLATAGLA FIVMLWMGRV EAAATPA
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