| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1346 |
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| Symbol | |
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| ID | 4075917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1433650 |
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| End bp | 1435158 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006656 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_613341 |
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| Protein GI | 99081187 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCCA TTTTTGACAC CGGCGCACCG CCTGCCTGCC CCCCAGCTTT CAATCTTGCG
GCGCATGTCT TGCGCCACGC CGCGAACCGT GCCGGTCACC CCGCCCTGGT GATTGCAGGA
CCGGAGCAGG ATCAGATCTG GACCTATGCT GCCTTTGAAC GCGCGGTGCG GGGAACCGCA
CGGGGCTTTC TCGAATCCGG ATTTGAGCCC GGCGATATCC TCTTGATGCG ATTGGGAAAT
ACCGTCGAAT TCCCGATTAC GTTTCTCGCC GCGATCCTGG TCGGTATTGT GCCAGTGCCG
ACATCTTCGC AGCTGACCAA ACGCGAGGTC GCGCGGATGG TGGAGGATCT ATCCCCCGCA
GGGATCGTCA GCGCGCCTGA CATCGCCACC CATCCGCACT CGCGCGCGGT CTCTCTTGAT
AGGCTGCGCG CCATGCAGTC CTGCCCACCA GCCGACGCCG TGCTCGGTGA TCCGGATCGG
CTCGCCTATA TCGTCTATAC CTCTGGCACT GGCGGATCTC CGCGCGCGGT GCAACATGCC
CATCGGGCTA TCTGGGCCCG GCAGATGATG ATCCGCGACT GGTATGACCT GAGCCGAAAT
GATCGCCTGC TGCATGCAGG AGCCTTCAAC TGGACCTTTA CCCTTGGCAC CGGGATCATG
GATCCGCTGT CCGTCGGTGC AACCGCCATC ATTCCATCTG CCGACACGGA TCTTTTGGAC
CTGCCGCGGG TATTGACGCG CACTCAGGCG ACGATCTTTG CCGCCGTACC AGGTGTTTAT
AGAAAGATTC TGAAGTGCGA CACCCTGCCC GTTCTGCCTG ACCTCAGACA TGGGCTTGCA
GCGGGTGAGG CTCTGAGTGG CGATATCCGC GACGGCTGGA AAGATCGAAT TGGCACCCCG
ATCTTTGAGG CCTTTGGCAT GTCTGAATGC TCCACCTTTA TCTCCTCGGC CCCGCATCGC
CCTTCTGTCG CACAGAGCAT GGGCGCGCCA CAACGCGGCC GCAGAATTGC GATCATCGGC
GAGGATGGCC CTGCTCCAAT CGGCGAAGAA GGGATCATCG CGGTTCACCG ATCTGATCCC
GGTTTGATGC TCGGCTACCT CAATGCCCCC GAGGAGACTC GCGCGCGCTT TGACGGTGAG
TGGTTTTTGA CCGGGGATCG TGGCATCATG CGGGCGGATG GCCAGATCAT CTATTGCGGG
CGCAACGACG ATATGATGAA TGCAGGGGGC TTTCGCGTCT CCCCGCTCGA GATCGAAACA
GTGTTTGCGA CCCATCCCGG TCTGTCTCAA TTTGCGGCGG CTGAGGTGGA GGTGAAACCC
GGCGTCCACA TCATCGTGGG CGTTTTCAAG GGTCGCGAGG ATGTGACCGA AATGGCGCTA
CAGGCTTTTG CACAAGAGCG TCTGGCCGCG TACAAACGCC CAAAGACTTA CAAGCGCCTG
GCGGAGTTTC CAACCAACCC GAATGGAAAA CTCTTGCGCC GCGCCCTGCC CGATCTGTTT
AAGGACTGA
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| Protein sequence | MLSIFDTGAP PACPPAFNLA AHVLRHAANR AGHPALVIAG PEQDQIWTYA AFERAVRGTA
RGFLESGFEP GDILLMRLGN TVEFPITFLA AILVGIVPVP TSSQLTKREV ARMVEDLSPA
GIVSAPDIAT HPHSRAVSLD RLRAMQSCPP ADAVLGDPDR LAYIVYTSGT GGSPRAVQHA
HRAIWARQMM IRDWYDLSRN DRLLHAGAFN WTFTLGTGIM DPLSVGATAI IPSADTDLLD
LPRVLTRTQA TIFAAVPGVY RKILKCDTLP VLPDLRHGLA AGEALSGDIR DGWKDRIGTP
IFEAFGMSEC STFISSAPHR PSVAQSMGAP QRGRRIAIIG EDGPAPIGEE GIIAVHRSDP
GLMLGYLNAP EETRARFDGE WFLTGDRGIM RADGQIIYCG RNDDMMNAGG FRVSPLEIET
VFATHPGLSQ FAAAEVEVKP GVHIIVGVFK GREDVTEMAL QAFAQERLAA YKRPKTYKRL
AEFPTNPNGK LLRRALPDLF KD
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