| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1336 |
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| Symbol | |
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| ID | 4075907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1424076 |
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| End bp | 1424825 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006646 |
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| Product | RNA methyltransferase TrmH, group 1 |
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| Protein accession | YP_613331 |
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| Protein GI | 99081177 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCAG ACCGTCCTCA ACCTGACTTT GTGCTCGTGC GCCCTCAGAT GGGTGAAAAC
ATCGGTGGGG CCGCGCGGGC CATGTGGAAC TTTGGCCTCG ACCGCATGCG TATCGTTGCG
CCGCGCGATG GCTGGCCAAA TCCCAAGGCC GTGGCCATGG CCTCCGGAGC GGGGCGCCTC
CTCGACGAAG CGCAACTGGC ACAGGACCTG CCCGAAGCGC TGGCGGATTG CACCTATGTC
TTTGCCACCA CGGCGCGCCC GCGCGAGCTG ACCAAACCGG TGTTCAGCCC CGAAGGGGCA
ATGAAGAAGG CCGCAGAACT GATGGTGCAG GGCGAGAAGG TTGCCGTTCT CTTTGGTCCG
GAACGCGCCG GATTGGAAAA CGATGACATT GCCAAGGCAA ACGCCATCAT CACCGTGCCG
GTGAACCCGG AGTTTGCCTC GCTCAACCTT GCGCAATGTG TCTTGCTGAC CGCCTATGAA
TGGCGCCGCC AGCAAGAGCA GGTCGCGCAT GAGACCTTTG AAATCGGGAA ATCCGAATGG
GCAACCAATC AAGAGGTGGA AGCCCTTGTG AACCACTATG AGGAGCGCCT GACGGAAGCG
GGCTATTTCT TCCCGCCCGA AAAGGCCCCC GGCATGAAGA CAGTGTTCCG CAACCTCTGG
AGCCGGATGC AACTGACGCG CGCTGATGTG CAAATGCTAC ATGGGGTGAT GCGACAGATG
GTCCGTTGGA AGCAGCGCGA AGAGGACTAA
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| Protein sequence | MPSDRPQPDF VLVRPQMGEN IGGAARAMWN FGLDRMRIVA PRDGWPNPKA VAMASGAGRL
LDEAQLAQDL PEALADCTYV FATTARPREL TKPVFSPEGA MKKAAELMVQ GEKVAVLFGP
ERAGLENDDI AKANAIITVP VNPEFASLNL AQCVLLTAYE WRRQQEQVAH ETFEIGKSEW
ATNQEVEALV NHYEERLTEA GYFFPPEKAP GMKTVFRNLW SRMQLTRADV QMLHGVMRQM
VRWKQREED
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