| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1328 |
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| Symbol | |
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| ID | 4078371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1414830 |
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| End bp | 1415831 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638006636 |
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| Product | phage integrase |
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| Protein accession | YP_613323 |
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| Protein GI | 99081169 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.478819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAGA AGTTGGAGCG AAAGTATGTG ACGACCAAGA CCGTCAAGGG TCGTGTCTAC
TATTATTTTC GGCGCGGAGA GACGTATCAG CGTCTTCCAA ATGACCCTGA CAGCCAAGAA
TTTGATGATG CTTATTGGGC CATCCGATCA GGGCGCGCGA AAAAAAAGGC CAAAACGACA
TTCGAGGCCC TGATTGTCAG CTACTACCAG ACGCCAGAGT TCAGAGATCG AAAGCCCAGA
GTGCAGCAAG AGTACAGACG CACGCTTGAG CTGATCAGAG AAAAGAACGG CCCCAAGGAT
TTCACCAAGC TGCGCAGGCG CGACGTTATT GCCGCTCGCG ATGCGTATGC CGATACATGG
CGTAAAGCAA ATGCAATGGT CGAGATGATT TCCATCCTAT CGCGTCACGC CATCGATCTT
GAATGGATTA CAGCAAATCC AGCAAGCGGG GTGAAGAAGC TGACGGGGGG TGAATATGAG
CCTTGGCCTG ACGCCAAGCT GCAAGCCTTC GAGGCATTTT GCAAGAAACA TGATCTCGAA
TGGGAATTGA CTGCCTACAT GCTGGGTGTG GGAACCGGTC AGAGAATCGG TGACGTGGTA
GGTATGGAGT GGGCGCACTA TGACGGCCAG TTCATCGCTG TCGTTCAAGA GAAGACAGCA
GCGCGTTTGT GGGTAGCTTG TCCTACGTTC TTGAAGCGAT ACCTCGACGG CTTGCCGCGT
AGAGGGCGCT TCATCATCGC GCAGTCACTG CACAAAGGAG TCGCGAAGCG GACTATTCAG
CAGCGCGTCA TGGCCGTGCG CGAGAAAATC GGTGCTGTTG GCTATGTAAT TCACGGATGG
CGATACACCG CTGCGGTCCA CCTGGCAGAG GCCGGTGCGA GCGATAGCGA GATCCAAGCT
GTGACCGGTC ACAAGACGCT TGAGATGGTC AAGAAATATC GAAGTCAAGC CAATCAGAAG
CGCCTTTCAA AGTCCGCACA AGCGCGACGG ACCAGAACAT GA
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| Protein sequence | MVKKLERKYV TTKTVKGRVY YYFRRGETYQ RLPNDPDSQE FDDAYWAIRS GRAKKKAKTT
FEALIVSYYQ TPEFRDRKPR VQQEYRRTLE LIREKNGPKD FTKLRRRDVI AARDAYADTW
RKANAMVEMI SILSRHAIDL EWITANPASG VKKLTGGEYE PWPDAKLQAF EAFCKKHDLE
WELTAYMLGV GTGQRIGDVV GMEWAHYDGQ FIAVVQEKTA ARLWVACPTF LKRYLDGLPR
RGRFIIAQSL HKGVAKRTIQ QRVMAVREKI GAVGYVIHGW RYTAAVHLAE AGASDSEIQA
VTGHKTLEMV KKYRSQANQK RLSKSAQARR TRT
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