| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1324 |
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| Symbol | |
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| ID | 4078367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1409890 |
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| End bp | 1412040 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638006632 |
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| Product | hypothetical protein |
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| Protein accession | YP_613319 |
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| Protein GI | 99081165 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.772779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC CTCGCTGGAG GTGGAAGAGT ATCTATACTA CAAACTATGA CACTCTCGTA
GAACAATCGT TCGATAGTGC CAAAAAGAGG TGTCGAGTAT ATTCTTCTAA CTTTGACTTC
CATATAGATG AGGAAGAATA CGATTGCGAG CTATTTAAGA TTCATGGGAC AATTGAAAAA
GATATTTCAA CCGGCCATCA TAGCAGAATT ATCCTGACTG TGGATGACTA CGATCATACT
GAAGAGTTTC GAGAACAGCT TTATGATCGG ATGCGCGGCG ATCTGGCAGG TGCCGATCTT
GTGATAATTG GGCAATCACT GTCCGATCCA GACATGGATA CTCTGGTGAG GCGGGCTGTA
AAGATCAATG AAAAAGCGCT ATCCCCTGGT CAGATCACAC TTCTGATCTA CTCTGAAAAC
CAAAGTCGTG CGCTCCTTCA AGAACGCAAA GGGTTGCGTG TAGTCTTCGG CGGAATTGAC
GAGTTCTTCA CGCGACTCGA CAAAAGACCG CCAAAGATCG CACCCGTCAT GATTTCGAAA
GACGACGAGG CGCTAATCGG CACGCATATA TCAAACTCTA TTGTCGAAGT GTCGGAAGTT
TCCAATGGAG CCGAAGCCGA CGTCAGTTCG ATGTTCAACG GCTGGCCTGC AACTCACCGA
GAGGTCGAAG CGGGCCTAAC ATTCGAACGC GATATCTCAC GTGAGGTTGC TAAACACTTT
GAAGATCCTT GTACCCTTTC TGGGGTTATT CTAGGGGCTG CCGGAGTAGG CAAGTCAACC
GCTGCCAGAC AGACATTACA ACTCCTCCGC CGCGCAGGCT TCAGGGCCTG GGAGCATGTG
AATGAACATA CTCTTAGCGT CGCCAACTGG AGAAAGATTG CCGGAAACCT CAAGGAAAGT
GAGCTCTTAG GTGTCCTGCT TGTAGACGAA GCACATTCTC ATTTGCACCA ACTTAATGAG
CTGATGGACC TGCTTGTCGC AGATGACAAT CCGCACCTGA AAATTCTTGC TGTTTCAACA
AAAAGCAATT GGATACCTCG AAGCAAAACA CCAAACTTCA ATCGTTGTGG GAAGGATTTT
TGGCTTTCAA AACTGTCTGT AGATGAGATC GACCGGCTCT TGAATTTAAT TGAACGACAG
CCGCGCATCC GTGAGCTTGT CGAGGAGTCT TTTAGCGGAT TCAACAAAGG CGAGCGCAGA
AGGCGGTTGG TGCATAGATG CGAAGCAGAC ATGTTTGTTT GTCTGAAGAA CATTTTTGCG
TCTGAGTCGT TCGACGATAT CATCCTTCGA GAATTTGCTG GCTTGGACGC CATCCCTCAG
GACATTTATA AACACGTCGC AGCTATGGAG ACACTCGGAG TACGCGTCCA CCGCCAACTT
GCCGTTCGCA TGCTTAACGT TGAAGCGAGC AATATCTCAA ATATTTTGAC TTCCTTGGAT
GATATCGTCG AAGAATATCC GGTTGATCGA CGCAAAGGAA TATATGGGTG GAAGTGCAGG
CATGGTGTCA TTTCAGAAAT TGTCACTAGA TACAAATTTG GGGATCTCGA ACAGATAATA
TCCCTCCTTG ATCACGTCAT AGATAACATT TCTCCGTCCT ACGATATTGA GGTTAGAACC
CTGCGCGAGC TTTGCAATCT CGACGGCGGA ATTTCACGAA TTCCCGAAAA GAAAGAGCAG
AATCGTCTAT TGAGGCGAAT GATATCCATG GCCCCAGGCG AGAGGGTTCC GCGACATCGG
CTGATCAGGA ACCTCATCGA CCAAGGTGAG TTTGAGAAAG CGGAAACGGA GATTCGCGTC
TTCAACTTTG ACTTCGGCTC AGACGGCCCC GTCCATCGCT ATAAAATTAA GTTGATGGTT
GCTCGAGCAG CTCGTGCGCC TGGTTTGCTC GATGAGGATA GAATTGTTAT TCTTGAGCAA
GCCCAAGAAC TTGCTTCGAC GGGTATCGCC AGGTTTCCGA ACAATAAGAG TATTCTGTCC
GCATATGCAG AGCTAGGTTT GGAGTATCTT CGTCGAACCG GGTCATACAG CTTTTTCGAT
GCCTCTATGG ATGAGTTGAA GGCTGCGGAA GGCCGACTCG GCGACCCAGA TATTACGGCT
ATGATCAGTC GCTTCGAACG TCGCGCAGCA GGCTCTGAGG CCGAACTCTG A
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| Protein sequence | MKIPRWRWKS IYTTNYDTLV EQSFDSAKKR CRVYSSNFDF HIDEEEYDCE LFKIHGTIEK
DISTGHHSRI ILTVDDYDHT EEFREQLYDR MRGDLAGADL VIIGQSLSDP DMDTLVRRAV
KINEKALSPG QITLLIYSEN QSRALLQERK GLRVVFGGID EFFTRLDKRP PKIAPVMISK
DDEALIGTHI SNSIVEVSEV SNGAEADVSS MFNGWPATHR EVEAGLTFER DISREVAKHF
EDPCTLSGVI LGAAGVGKST AARQTLQLLR RAGFRAWEHV NEHTLSVANW RKIAGNLKES
ELLGVLLVDE AHSHLHQLNE LMDLLVADDN PHLKILAVST KSNWIPRSKT PNFNRCGKDF
WLSKLSVDEI DRLLNLIERQ PRIRELVEES FSGFNKGERR RRLVHRCEAD MFVCLKNIFA
SESFDDIILR EFAGLDAIPQ DIYKHVAAME TLGVRVHRQL AVRMLNVEAS NISNILTSLD
DIVEEYPVDR RKGIYGWKCR HGVISEIVTR YKFGDLEQII SLLDHVIDNI SPSYDIEVRT
LRELCNLDGG ISRIPEKKEQ NRLLRRMISM APGERVPRHR LIRNLIDQGE FEKAETEIRV
FNFDFGSDGP VHRYKIKLMV ARAARAPGLL DEDRIVILEQ AQELASTGIA RFPNNKSILS
AYAELGLEYL RRTGSYSFFD ASMDELKAAE GRLGDPDITA MISRFERRAA GSEAEL
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