| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1305 |
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| Symbol | |
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| ID | 4078504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1397338 |
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| End bp | 1397748 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006613 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_613300 |
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| Protein GI | 99081146 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.340031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAAGT GGGAAGGTGT GCGGCTTGAG GCCTACCGCG ATATCGTGGG TGTGCCGACG
ATCTGTTTCG GCGATACTCA CGGCGTTCAG ATCGGTGACA CTGCGACTAT GGCTGAATGC
GTCGACCGGC TCGAGAAAGA TGTGCGTGCA TTTTATTCCG AGATCCGTCC TTGCATGACG
AACCCGAATA TTCCGGCAGG TGTTCAGGCC TCCATGCTAG AGCTTGCATA CAATGTTGGG
TCTGGCCCGG TTTGTCGGTC GACGATGATG CGCCTTGCAA ACGCTGGTAA GCACCGGGCC
GCGTGCGATG AACTGCGCCG CTGGGTGATC GCGGGTGGCA AACGGGTGCG CGGGCTAGCC
AATCGCCGGG CCGATAGCAA GCGAACGCTG TGCCTCAAGG GGCTGACCTG A
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| Protein sequence | MAKWEGVRLE AYRDIVGVPT ICFGDTHGVQ IGDTATMAEC VDRLEKDVRA FYSEIRPCMT
NPNIPAGVQA SMLELAYNVG SGPVCRSTMM RLANAGKHRA ACDELRRWVI AGGKRVRGLA
NRRADSKRTL CLKGLT
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