| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1300 |
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| Symbol | |
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| ID | 4078499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1392128 |
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| End bp | 1393741 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006608 |
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| Product | phage portal protein, lambda |
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| Protein accession | YP_613295 |
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| Protein GI | 99081141 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5511] Bacteriophage capsid protein |
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| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.616273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTGGC GACTGTTCAG ACGCGAAGAT CCTGTTGCGC CGGAGCCGGA TCGCAAGCCC
CCTCCAATGC TGACGGCACC CCGAAGGCGT GGCCAGCGCA TGTTTGCCGC CGCAGAGACA
GATCGCATGA CAAGCGGTTG GACCAATTCA CCAATGCCAG CGGATCAAAT CATCCGCCGC
AATTGGCGCG TGCTGGTGGC ACGTTCGCGC GAGCAGTCGG CGAACAACGA CTATGCAAAG
GCGTTCAAGG CCAGCGCACG GCGAAACCTG ATTGGACAGA AGGGGTTCAC ACTGCAGGCG
CAGGCGTTTG ACGGTGACAA GCTGGACGCA CAGGCAAACA AGGCCATCGA ACGCGCATGG
CGCGCCTGGT GCAAGGCGAT GAATTGCGAC GTCAAAGGGC GTCGCACCTT ACGGCAGATC
CAGAAAACGA TTGTGAACGG CCTTTGCACC GATGGCGAGT TTATGGTGCG CATGGTGGTT
GGGCGGGATG CGGGCCCGTG GGGATTTGCA TTGCAGATCC TCGACCCGGT GTTGTGCCCG
GTCGATTTTG ATGAGGATCG TCGCCCCGGT GGTGGGTTCA TTCGGGCAGG GATCGAATAT
ACGAAGATGG GCCGACCCGT GGCCTATTAT TTCACCACCC TCGATCAATC GCAGGCCGAT
TATCACTATT CCGGGCGGGC GTTCATCCGG GTTCCGGCGG ATGAAATTAT CCACTGGTTT
GAAGAGGATT TTGTCGGGCA GAAACGCGGG CTGCCGTGGA TGGCGACCGC GCTCTTGCGT
ATGCGCCAAC TTGGCGAGTT CGAGAAAAGC GCTCTGAACA ACGCTCGTGA AGGCGCGAAC
AAGGTCGGCG TGATCGAATG GGACGAAGGG TTCGGCCCTG AGCCAGAAGA GGACGACGCC
ACCAAGAGCG ACGATGATCT AGGCTTTGAG GACATCGAAC TCGATAGTGA AATGGGAGTT
TATCATCAGC TCCCGATGGG TGCGCGTCTA AAGCGGGTCG AAACCGGATA TCCAAACGGC
GAAATGGCGG TGTTTTCAAA GCACATGCTG CGCGGGGTCG CGACAGGCTT GGGCGTTGCC
TACAACGATC TTGCCAATGA CCTTGAGGGC GTGAATCTAT CGAGCATCCG CCACGGCGTT
TTGAGTGAGC GGGACCAGTG GATTGAGTTG CAAGAGAGCC TGATCGAGGC CTTTGCCTTG
CCGATCTATG AGCGTTGGCT CGAATACTCG CTGCTGAAAC AGAAAATCAC CCTCGACAAC
GGATCGCCGC TGCCAGCGAG CAAGCGGTCG AAGTTCATGG CGGTGACCTT CCAGGCACGG
CGCTGGCAGT GGATTGATCC TGCAAAAGAC GTGACGGCCG ACGCCGACGC CGTCGACAAC
CTGTTCAAGT CGCGCGGTCA GGTGATCCGC GAGCGCGGGC GCGACCCGCG CGAGGTCTAT
GCCGAGGTCG CAGAAGATAT CGCAGCGATG CGCGAGGCGA AAATCCCCGA CAACGTGATC
GAGGCCTTGA TCACAGCCAA ATCAAAAGGA GGGCAGGGCA GTGGACAGCC AGCCAAAACC
GGCACCGGAG AAACCGACCC AGACGCCGAC CCAGACCCCG ACAAAAGCGA ATGA
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| Protein sequence | MIWRLFRRED PVAPEPDRKP PPMLTAPRRR GQRMFAAAET DRMTSGWTNS PMPADQIIRR
NWRVLVARSR EQSANNDYAK AFKASARRNL IGQKGFTLQA QAFDGDKLDA QANKAIERAW
RAWCKAMNCD VKGRRTLRQI QKTIVNGLCT DGEFMVRMVV GRDAGPWGFA LQILDPVLCP
VDFDEDRRPG GGFIRAGIEY TKMGRPVAYY FTTLDQSQAD YHYSGRAFIR VPADEIIHWF
EEDFVGQKRG LPWMATALLR MRQLGEFEKS ALNNAREGAN KVGVIEWDEG FGPEPEEDDA
TKSDDDLGFE DIELDSEMGV YHQLPMGARL KRVETGYPNG EMAVFSKHML RGVATGLGVA
YNDLANDLEG VNLSSIRHGV LSERDQWIEL QESLIEAFAL PIYERWLEYS LLKQKITLDN
GSPLPASKRS KFMAVTFQAR RWQWIDPAKD VTADADAVDN LFKSRGQVIR ERGRDPREVY
AEVAEDIAAM REAKIPDNVI EALITAKSKG GQGSGQPAKT GTGETDPDAD PDPDKSE
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