| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1275 |
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| Symbol | |
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| ID | 4077435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1373500 |
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| End bp | 1374510 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638006583 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_613270 |
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| Protein GI | 99081116 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.732042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCC TCAATGCCTT CGTGGCGCTT TCAAACTTTG TTCTGATCCC CGGCATCGCC
TATGGCAGCC AACTGGCGCT TGGCGCACTT GGGGTGACGC TGATCTACGG GATCTTGCGC
TTTTCGAACT TTGCCCATGG GGACACCATG GCCTTTGGGA CCATGGTCGT GATCCTGTTT
ACTTGGCTGT TCCAGTCCTG GGGCATCTCC GCAGGCCCGC TGCCAACCGC GCTTCTGGCG
TTGCCAATCG GGATCGTGAT GACCATGGGG TTGGTTCTGA TCACCGACAA GGCCGTGTTC
AAATTCTACC GCGAGCAAAA AGCAAAGCCC GTGGTCTTTG TGATGGTCTC GCTTGGCGTG
ATGTTCATGA TGAACGGGCT TGTGCGCTTT ATCATCGGTC CCGGCGATCA GCGGTTTGGT
GATGGCGAGC GGTTCATCAT CAAGGCCCGC ACCTTCAAGC AGATGACCGG TCTTGATGAG
GGTCTAGCAA TCAAGACCTC GCAGGGCATC ACCGTGGTCA CAGCCATTGT TGTGGTGGCG
CTGTTGTTCT GGTTCCTCAA CAAGACCCGA ACGGGCAAAT CCATGCGCGC CTATTCCGAC
AACGAGGATC TGGCGCTGTT GTCTGGCATC AATCCCGAAC GCGTGGTCAT GATCACATGG
ATCATCGTCG CAGCACTGGC GACCATTGCC GGCACGCTAT ACGGGCTTGA TAAGTCATTC
AAACCTTTCA CTTATTTCCA GCTTCTCCTG CCGATCTTTG CGGCGGCCAT CGTGGGCGGT
CTCGGCAGCC CTCTGGGCGC AATCGCTGGT GGGTTTGTCA TCGCCATGAG CGAGGTGATG
ATCACCTACG CTTGGAAAAA AGTGGGCGGT TACCTGCTGC CTGAAAGCCT GGAACCAGAG
GGGCTCGCAC AGCTTCTGAG CACGGATTAC AAATTTGCGG TTTCCTTTGC GATCCTCGTC
GTTGTGCTGC TGTTCAAACC CACCGGTATC TTCAAAGGAA AAGCGGTATG A
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| Protein sequence | MDFLNAFVAL SNFVLIPGIA YGSQLALGAL GVTLIYGILR FSNFAHGDTM AFGTMVVILF
TWLFQSWGIS AGPLPTALLA LPIGIVMTMG LVLITDKAVF KFYREQKAKP VVFVMVSLGV
MFMMNGLVRF IIGPGDQRFG DGERFIIKAR TFKQMTGLDE GLAIKTSQGI TVVTAIVVVA
LLFWFLNKTR TGKSMRAYSD NEDLALLSGI NPERVVMITW IIVAALATIA GTLYGLDKSF
KPFTYFQLLL PIFAAAIVGG LGSPLGAIAG GFVIAMSEVM ITYAWKKVGG YLLPESLEPE
GLAQLLSTDY KFAVSFAILV VVLLFKPTGI FKGKAV
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