| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1255 |
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| Symbol | |
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| ID | 4077649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1352244 |
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| End bp | 1353467 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006563 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_613250 |
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| Protein GI | 99081096 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.229688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGATG ACAAACCCAC ACTTCGCGCA AAAGATGCAC CTGACCTTGG CCGCTTTGCT
TGGGACGACC CGCTGCGCCT GAGCGATCAG CTGACCGAAG ACGAACGCAT GATTGAAGCC
TCTGCACGCG CTTACGCACA GGAAAAACTG CAAAGCCGTG TGACTGAGGC CTATGAGACC
GAACAGACCG ATCCCGAGAT TTTCCGCGAA ATGGGCGAAA TGGGGCTTCT GGGCACCACG
ATCCCAGAGG AATACGGCGG CCTCGGTGGC GGTTATGTCT CCTACGGCCT GGTGGCACGC
GAAGTGGAAC GTGTCGACAG CGGCTATCGC TCCATGATGT CGGTGCAAAG CTCGCTGGTG
ATGTACCCGA TCTACGCTTA TGGCAGCGAG GAGCAGCGCC AGAAATATCT GCCGAAACTC
GCCTCCGGTG AGTGGATCGG TTGTTTTGGT TTGACCGAAC CCGATGCGGG CTCAGATCCG
GCCGGCATGA AAACACGCGC CGAAAAGACC GCAGATGGCT ATCGCCTCAC GGGCTCCAAA
ATGTGGATTT CGAACGCGCC CATCGCCGAT GTCTTTGTGG TTTGGGCAAA ATCCGAAGCC
CACGGCGGCA AGATCCGCGG ATTTGTGCTC GATAAGGGCA CCAAGGGCCT GTCGGCTCCG
AAAATTCAAC AGAAGATGTC ACTGCGCGCT TCGATCACGG GTGAGATCGT CCTGGATGGG
GTCGAGGTTG GCGAAGAGGC GCTGCTGCCA CATGTCGAAG GACTGAAGGG ACCCTTTGGC
TGTTTGAACC GCGCGCGTTA CGGGATCAGC TGGGGTGTCA TGGGGGCGGC GGAAGCCTGC
TGGCATGCGG CGCGCCAGTA TGGCCTCGAC CGCCATCAGT TTGGGCGCCC TCTGGCGAAC
ACGCAGCTCT TCCAGTTGAA ACTGGCCAAT ATGCAAACCG AGATCGCGTT GGGCCTGCAA
GCCTCCTTGC GTGTTGGGCG TCTCATGGAT GAGGCCAATG CCGCGCCGGA GATGATCTCC
ATCGTAAAGC GCAACAACTG CGGCAAGGCT CTCGAAATTG CACGGCATGC GCGTGACATG
CACGGCGGCA ACGGCATCAG CCTTGAGTTC CAGGTCATTC GTCACATGAT GAACCTTGAG
ACCGTGAACA CCTACGAAGG CACGCATGAC GTCCATGCCC TGATCCTTGG GCGCGCGCAG
ACCGGCCTGC AGGCGTTCTT CTAA
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| Protein sequence | MLDDKPTLRA KDAPDLGRFA WDDPLRLSDQ LTEDERMIEA SARAYAQEKL QSRVTEAYET
EQTDPEIFRE MGEMGLLGTT IPEEYGGLGG GYVSYGLVAR EVERVDSGYR SMMSVQSSLV
MYPIYAYGSE EQRQKYLPKL ASGEWIGCFG LTEPDAGSDP AGMKTRAEKT ADGYRLTGSK
MWISNAPIAD VFVVWAKSEA HGGKIRGFVL DKGTKGLSAP KIQQKMSLRA SITGEIVLDG
VEVGEEALLP HVEGLKGPFG CLNRARYGIS WGVMGAAEAC WHAARQYGLD RHQFGRPLAN
TQLFQLKLAN MQTEIALGLQ ASLRVGRLMD EANAAPEMIS IVKRNNCGKA LEIARHARDM
HGGNGISLEF QVIRHMMNLE TVNTYEGTHD VHALILGRAQ TGLQAFF
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