| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1210 |
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| Symbol | rpsB |
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| ID | 4076345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1299082 |
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| End bp | 1299852 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006517 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_613205 |
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| Protein GI | 99081051 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCTTC CCGAGTTCAC CATGCGTCAG CTGCTCGAAG CTGGCGTTCA CTTTGGTCAC
CAGACTCAGC GCTGGAACCC GCGCATGTCG CCCTTCATCT ACGGCGCGCG CAACGGCATC
CACATCATGG ACCTCACCCA GACTGTTCCG ATGCTGGACC AGGCTCTGAC CGCGATCCGT
GACACCGTCG CCAAAGGCGG CCGCGTTCTG TTTGTTGGCA CCAAGCGTCA GGCCGCAGCG
CCGATCGCCG AAGCCGCAGA GAAATCCGCG CAGTACTACA TGAACCACCG TTGGCTCGGC
GGCACGCTGA CCAACTGGAA AACCGTATCC CAGTCGATCA ACCGTCTGAA AGAGATCGAC
GAGCGCATGG CTGCTGGTGC CGAAGGCCTG ACCAAGAAAG AGCGTCTGGG CATGGAGCGT
GACCAGGAGA AGCTGCAAGC GTCCCTCGGC GGTATCCGCG ACATGGGCGG CGTTCCGGAC
CTGCTGTTCG TCATCGACGT GAAAAAAGAA GCGCTGGCAA TCGCCGAAGC CAACAAACTG
GGTATCCCGG TTGTGGCTGT TGTCGATACC AACTGCTCGC CCGATGGTGT AGACTACATC
ATCCCCGGCA ACGATGACGC GGCGCGCGCG ATTTCGCTCT ACTGCGATCT GGTTGCCCGT
GCAGCACTGG ACGGCATGTC CGCGCAGCTC GGCGCTGCCG GTGTTGACCT CGGTGCTCTG
GAAGAGGCAC CTGTCGAAGA AGCCGTCGCT GAAGAAGCAG CCGGCGCCTG A
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| Protein sequence | MALPEFTMRQ LLEAGVHFGH QTQRWNPRMS PFIYGARNGI HIMDLTQTVP MLDQALTAIR
DTVAKGGRVL FVGTKRQAAA PIAEAAEKSA QYYMNHRWLG GTLTNWKTVS QSINRLKEID
ERMAAGAEGL TKKERLGMER DQEKLQASLG GIRDMGGVPD LLFVIDVKKE ALAIAEANKL
GIPVVAVVDT NCSPDGVDYI IPGNDDAARA ISLYCDLVAR AALDGMSAQL GAAGVDLGAL
EEAPVEEAVA EEAAGA
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