Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1202 |
Symbol | |
ID | 4076337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1292084 |
End bp | 1292620 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638006509 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_613197 |
Protein GI | 99081043 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.221931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTTTGG ATCAGACAGA TCAGCAAGCC ATCATCGAGG CGGATCGTTT TGATCTGCGG CCCTTGCGTC CGTCGGATGT GGGATTGATC GAACATTACG CAGGAGATGC GCGCATCGCA AAGATGACCG CACCGATCCC GCATCCGTAT CCCCCCGGCG CGGCCGAAGC CTATGTCAAA CGCGGCATCG AGGCAGAGCA GGGAGAGTTC ATCTGGGCGA TGGATGGCAC GAAAGACGGC AATCCTGAAC TCATGGGTGT GATCTCGCTG AAGTCCATGG ACCGCAACCA GTCCGAGGTT GGCTATTGGG TGGCGCCAGC GTTCTGGAAT ACGGGCCTTG CGTCCATGGC GGTACAGCTT CTGGTCGAGG CGAACCCTCT GGGTGATGCC ACCATGTTTG CAAGTGTGTT TCAGGACAAC CCGGCCTCGG CGCGGGTACT GGCGCATTGC GGCTTTGAAT ACCTTGGTGA CGCAGAAGAT TTCAGCGTCG CACGGGATGC CAATGTCCCA ACATGGACCT ACAGCCGAAA GCTGTAA
|
Protein sequence | MGLDQTDQQA IIEADRFDLR PLRPSDVGLI EHYAGDARIA KMTAPIPHPY PPGAAEAYVK RGIEAEQGEF IWAMDGTKDG NPELMGVISL KSMDRNQSEV GYWVAPAFWN TGLASMAVQL LVEANPLGDA TMFASVFQDN PASARVLAHC GFEYLGDAED FSVARDANVP TWTYSRKL
|
| |