Gene TM1040_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1202 
Symbol 
ID4076337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1292084 
End bp1292620 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content58% 
IMG OID638006509 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_613197 
Protein GI99081043 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.221931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTGG ATCAGACAGA TCAGCAAGCC ATCATCGAGG CGGATCGTTT TGATCTGCGG 
CCCTTGCGTC CGTCGGATGT GGGATTGATC GAACATTACG CAGGAGATGC GCGCATCGCA
AAGATGACCG CACCGATCCC GCATCCGTAT CCCCCCGGCG CGGCCGAAGC CTATGTCAAA
CGCGGCATCG AGGCAGAGCA GGGAGAGTTC ATCTGGGCGA TGGATGGCAC GAAAGACGGC
AATCCTGAAC TCATGGGTGT GATCTCGCTG AAGTCCATGG ACCGCAACCA GTCCGAGGTT
GGCTATTGGG TGGCGCCAGC GTTCTGGAAT ACGGGCCTTG CGTCCATGGC GGTACAGCTT
CTGGTCGAGG CGAACCCTCT GGGTGATGCC ACCATGTTTG CAAGTGTGTT TCAGGACAAC
CCGGCCTCGG CGCGGGTACT GGCGCATTGC GGCTTTGAAT ACCTTGGTGA CGCAGAAGAT
TTCAGCGTCG CACGGGATGC CAATGTCCCA ACATGGACCT ACAGCCGAAA GCTGTAA
 
Protein sequence
MGLDQTDQQA IIEADRFDLR PLRPSDVGLI EHYAGDARIA KMTAPIPHPY PPGAAEAYVK 
RGIEAEQGEF IWAMDGTKDG NPELMGVISL KSMDRNQSEV GYWVAPAFWN TGLASMAVQL
LVEANPLGDA TMFASVFQDN PASARVLAHC GFEYLGDAED FSVARDANVP TWTYSRKL