| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1192 |
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| Symbol | |
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| ID | 4077801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1282229 |
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| End bp | 1283944 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006498 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_613187 |
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| Protein GI | 99081033 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.261243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATC AACGAGTGAA AAACTGGCAA AGCCTGTCTG GTGACGGGGC CTTTGACGTC
GTGGTCGTGG GCGGTGGCGT CAATGGGATC GGCACCTACC GGGAGTTGGC GTTGCAGGGA
TTGCGCGTTC TTCTGGTCGA GCGGGGCGAT TTTGCCAGCG GCTGTAGTGC GGCGCCGTCG
CGGATGATCC ATGGCGGCCT GCGATATCTG GAGAATGGCG AGTTCGACCT GGTGCGCGAG
AGCCTGCAGG AGCGCGATGC GCTGTTGGTG AACGCGCCGC ATTTTGTGCA TCCGCTGCCG
ACGGTTATCC CCGTGACCTC GCTGTTTTCC GGTCTGTTCA ACGCGGCGGC GTCCTTTTGG
GGGCTGAGCA GCAAACCAGC GCCGCGTGGT GCGGTGCCGA TCAAGCTGGG ACTGAGCCTT
TATGACTGGG TAAGCCGCAA ACGCCGCCTG ATGCCAAGGC ACAGCTTTCA GGGACGCCGC
GCCACCCGCC GCGACTGGCC CGAGCTGATG GAGGAGGCGC GGGGCACCGC GACCTACCAT
GATGCCTGGA TCGGGTTTCC AGAGCGTCTC TGTATCGAAA TGCTTCAGGA TGTGGCGCGG
GTGGCGCCGG GCTGTGTCGC GCTCAATTAT TGCGAGATCG CAGCGGAGAC CGGCGGGTTC
AGTGTGACCT GCCAGCGCAG CGGTCAGACC GCAGAGATAC GGCCCCGGCT CATTGTCAAC
GCCACGGGAG CCTGGCTGGA TGAAACCGTG GCGCAGCTCG GCGGGACGGC GCCGCGGATG
GTGGAGGGCA CCAAGGGCTC GCATCTGATT TTGGATCACC CGGAGCTTTT TGCCGCGCTC
AAGGGCAATA TGGTCTTCTT TGAAAACGAT GACGGGCGGG TCTGTATCGT GTTTCCGTTT
CACGATCGGG TGCTGGCGGG CTCGACCGAT ATACGGGTGG CGCGCACCGG ACGCGTGCGC
TGCGAGCCGG AGGAGACCGA CTATATCCTC GGTGCGCTCG CGAAAGTGTT TCCGGGGCTG
CAGATTGACG CCAGTCAGAT CGTGTTCAGC TATTCCGGAA TCCGGCCCTT GCCGCAGAGC
GACCAGGATT TTACCGGCCG GATTTCGCGC GGCCACGACA TTCGCAAACT GGAGGGCAGG
GTGCCCCAGC TCTGCATGAT CGGTGGCAAA TGGACCACCT TTCGCGCTTT TGCGCAGCAG
ACGGCAGATG CAGCGCTCGG GGAGCTTCGG CACGGTCGGC GCGTTGATAC GCTGGATCTG
GCGATTGGGG GCGGGGCGAA GTTTGAAGGG CGAGAAGCCC AGATCCTGCA GGAGCTTTGC
AAGGTACAAA ACCTCAGCCA CGCCCGCGCC GGTCATCTCT TGCAGCGCTA CGGCAGCCAT
GCCCCCAAGG TCGCAATCGC CTGTGGTCGC GAGGACCGCC CGCTGGCCGC AGGGACGCTC
TATTCCGAGG GCGAGATCCT GCACCTTATC CGAAGCGAGT TTGTCGAAAC CCTATCGGAT
CTGGCCCTTC GGCGCACGGA TCTGGCGATC TCTGGCGTGC TCTCGATGCA GATCATCGAG
GCGCTGGCGG CGCTGATGGC GCAGGAAACG GGTCTCTCGC CTGATCTCAT CACGGCTCAG
AAACAGGATC TGATTGCAGA GCTGAGCACC TATCACGGCG TAACCGCCGC AACTCTTGAA
CGTCGAAATA CCGAAAGGAA TGCCCAATGC GCATGA
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| Protein sequence | MPDQRVKNWQ SLSGDGAFDV VVVGGGVNGI GTYRELALQG LRVLLVERGD FASGCSAAPS
RMIHGGLRYL ENGEFDLVRE SLQERDALLV NAPHFVHPLP TVIPVTSLFS GLFNAAASFW
GLSSKPAPRG AVPIKLGLSL YDWVSRKRRL MPRHSFQGRR ATRRDWPELM EEARGTATYH
DAWIGFPERL CIEMLQDVAR VAPGCVALNY CEIAAETGGF SVTCQRSGQT AEIRPRLIVN
ATGAWLDETV AQLGGTAPRM VEGTKGSHLI LDHPELFAAL KGNMVFFEND DGRVCIVFPF
HDRVLAGSTD IRVARTGRVR CEPEETDYIL GALAKVFPGL QIDASQIVFS YSGIRPLPQS
DQDFTGRISR GHDIRKLEGR VPQLCMIGGK WTTFRAFAQQ TADAALGELR HGRRVDTLDL
AIGGGAKFEG REAQILQELC KVQNLSHARA GHLLQRYGSH APKVAIACGR EDRPLAAGTL
YSEGEILHLI RSEFVETLSD LALRRTDLAI SGVLSMQIIE ALAALMAQET GLSPDLITAQ
KQDLIAELST YHGVTAATLE RRNTERNAQC A
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