| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1190 |
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| Symbol | |
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| ID | 4077799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1280191 |
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| End bp | 1281171 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006496 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_613185 |
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| Protein GI | 99081031 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.11475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAGC ACAGACAAGG GTTCGAAACC GTCCGCCAGA TCCACACTGT TTTGGTCCTT
CATTTTATCG AGGGCAAGAA ACAGTCGGAG ATCGCGACCG AACTGAACCT CTCCACATCC
AAGGTGAACC GGCTGATCTC TCAGGGGCGC AAGCTGGGCA TGCTGAAGAT CGAGATCGAG
AGCCCGTTTC AGCGGCTCAT GGACATTGAG GAGGCCGTCA CCCGCTTTGC CAATCTCGGC
AGCGCCGTTG TGACGCCGAC CGTGGAGGGC AGCGAAAAAG CGACGCTGCA GCAGGTTGGC
CGCGCTGCGG CTAGCCACCT GACCGAGACG CTGCGCGATG GCGATGTCAT TGCGATTACC
GGTGGCAAGG CGGTGAGCGC CCTGGTCGAT GGACTTGATG TGGAGCGGCA ATGGGACGTG
ACCGTTGTGC CGCTCACAGG GGGGGTGCAG GGCAAATATT TCACCGACGT TAACCACCTC
GCCACCCGGT TGGCTGAACG TCTGGGGGGC AAGACCATGC TGCTGCATGC GCCGCTCTTT
GCCGAAAGCA AGGCCCAGCG CGACATGCTG ATGGATATTT CCTCCATCAA GGAAGTGCTC
GATCTGGCCC GTCGCGCCAA TGTGGCGCTT GTGGGGATCG GCTCCGTGCA GCCAGCGGAA
TCAAGCTATT ACGACCTCCA CCCGGTGCCG GAAGCCGATC GCAAGATGCT TGTGGGCACC
GGTGTTGTGG GCGAGTTCAT GGGCCATCTG ATCCGCGACA ATGGTGCGGT GGCCAATTTC
GCCCTTAACT CGCGCCTCGT GGCCCTGTCG CCACAGGAAC TGGGCCAATG TGAGCGCGTG
ATCGGGATCG CGGCGGGCGC CAGCAAGGTG CGCCCCATCG AGGCGGCGCT TGAAGGCGGG
TTTCTGAGCT CGCTCATCGT TGACGAAGAC ACGGCCGCAG AAGTGCTGCA GAAATATGAA
GGAACTGAAT ATGTCGCATG A
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| Protein sequence | MVEHRQGFET VRQIHTVLVL HFIEGKKQSE IATELNLSTS KVNRLISQGR KLGMLKIEIE
SPFQRLMDIE EAVTRFANLG SAVVTPTVEG SEKATLQQVG RAAASHLTET LRDGDVIAIT
GGKAVSALVD GLDVERQWDV TVVPLTGGVQ GKYFTDVNHL ATRLAERLGG KTMLLHAPLF
AESKAQRDML MDISSIKEVL DLARRANVAL VGIGSVQPAE SSYYDLHPVP EADRKMLVGT
GVVGEFMGHL IRDNGAVANF ALNSRLVALS PQELGQCERV IGIAAGASKV RPIEAALEGG
FLSSLIVDED TAAEVLQKYE GTEYVA
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