| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1189 |
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| Symbol | |
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| ID | 4077798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1279188 |
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| End bp | 1280183 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006495 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_613184 |
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| Protein GI | 99081030 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.227031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAT CTGTGAACAT CGCACTGGCC GAAACATCGA GGGGAAAATC GCTTTTGGGG
CGGCTCTTGC GGATGCGCGA AACGGGCCTC ATTCTGATTA TCCTGGCGCT TTTCATCGGC
ATGTCCTTTG CCTCGCCCTA TTTTCTGACA TGGGTCAATA TTCGCGCCAT GACCATGGCC
TTTGCCGTCG AAGGCATCGT GGTTGTGGGC ATGACGGTTT TGCTGATTTC TGGCGGCATC
GACCTTTCGG TGGGGTCGGT CACGGCTCTG TCGGGGGTGA TCGCGGGCTG GCTGTTCCTG
CAGGGGATTG ACCCCTGGGT GGCCGCAGCG ATTGCGATTT TTGCCTGTAC CGCCATCGGG
TCGTTCATGG GGTTCTTTAC CACGCGGATC GGGCTGCACC ATTTTATCGT GTCGCTTGCC
GTCATGGTGA TTGCACGCGG GATCTGTCTT TTGGCGACGG GCGGGCGGCC CATCGGGCTC
TATACGCTGC CGCCAGAGTT CAAATTCATC GGGCAGGGCA CCATTGGTCC CATTCCGGTT
GTGATCATCC TCTTTGTTGT GGTGGTGATC GCCGCGGATT TCATGCTGCG CCGCACCACC
ATGTTCCGCA AGGTGTTCTA CACCGGCTCC AACGAGAAGG CCGCCGCCTA TTCCGGCATC
CGCACCAAGA AGGTGGTGTT TTTGACCACG ACGCTTTGCT CTGCGCTTTG TGGGTTCGCC
GGGATCATCT ACATGGCGCG CTTCGGGTCT GCGCAGCCGA CCTTTGGACT CGGGATGGAA
CTGAACGTCA TCGCCGCTGC GGTGATCGGC GGTGCGAGCC TCAACGGCGG CTCGGGATCC
ATCTTTGGCG CGATCCTTGG GACGGTGCTG TTGTCGGTGG TGTCGTCTTC GCTCGCGCTC
TTGGATGTGT CGGTCTACTG GCAGGACATC ATCCGGGGGT CGATCCTTCT GGCGGCGGTG
ACAATCGACC ACTTCCTCAA CAAGAAGCGG GGCTGA
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| Protein sequence | MEQSVNIALA ETSRGKSLLG RLLRMRETGL ILIILALFIG MSFASPYFLT WVNIRAMTMA
FAVEGIVVVG MTVLLISGGI DLSVGSVTAL SGVIAGWLFL QGIDPWVAAA IAIFACTAIG
SFMGFFTTRI GLHHFIVSLA VMVIARGICL LATGGRPIGL YTLPPEFKFI GQGTIGPIPV
VIILFVVVVI AADFMLRRTT MFRKVFYTGS NEKAAAYSGI RTKKVVFLTT TLCSALCGFA
GIIYMARFGS AQPTFGLGME LNVIAAAVIG GASLNGGSGS IFGAILGTVL LSVVSSSLAL
LDVSVYWQDI IRGSILLAAV TIDHFLNKKR G
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