| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1178 |
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| Symbol | |
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| ID | 4077787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1269225 |
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| End bp | 1269887 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638006484 |
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| Product | ABC transporter related |
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| Protein accession | YP_613173 |
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| Protein GI | 99081019 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00268171 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTTTGA GTGTGAACGG CCTGACCCAT CGCCACCCCG GCGGGACCCG CGATGTGCTG
CGGGATGTCT CGTTCGAGGT GGCGCGCGGC GAAAGCGTGG CCCTGACCGG AGAGAGCGGC
TCGGGCAAAA GCACGCTCTT GCACATGCTG GCAGCGCTGG ACCGCCCCAG CCACGGAGAG
ATCCGCTTTC TGGAACACGA GATCACCCGG CTCAATGATC GCGCAGCCTC GGAGCTTCGG
CGCAGCCGCA TTGCGTTGGT CTTTCAACAG TTCAACCTCG TGCCCGCGCT TACGGTTGCG
GACAATATCG CGCTTCACGC CAAGCTCGGC GGGCGATTTG ATCCCGCCTG GAGTGCGGAA
GTCACGTCTC GACTGGGCCT TGCGGATCTC ACTGCGCGCT ACCCCGAGCA AATCTCTGGC
GGGCAGCAGC AACGGGTGGC GATTGCGCGC GCCCTGACCC TGCGCCCGGA TCTTCTGTTG
GCGGATGAGC CCACCGGCAA TCTAGATGAA ACCGCAAGCG CGGAGGTGCT GCGCCTGATG
CTGGAGCTGG TCGCGGACAC CGGTTGTGCC TTGTTCCTTG TCACCCATTC CGCCGCCATC
GCGGCGCGCT GCAGTCGGCA CCTGCACCTG AGGGCCGGGC AGGTGCGGGA TCACGCCCCA
TGA
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| Protein sequence | MLLSVNGLTH RHPGGTRDVL RDVSFEVARG ESVALTGESG SGKSTLLHML AALDRPSHGE
IRFLEHEITR LNDRAASELR RSRIALVFQQ FNLVPALTVA DNIALHAKLG GRFDPAWSAE
VTSRLGLADL TARYPEQISG GQQQRVAIAR ALTLRPDLLL ADEPTGNLDE TASAEVLRLM
LELVADTGCA LFLVTHSAAI AARCSRHLHL RAGQVRDHAP
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