| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1174 |
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| Symbol | |
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| ID | 4077783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1263806 |
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| End bp | 1264339 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638006480 |
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| Product | AsnC family transcriptional regulator |
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| Protein accession | YP_613169 |
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| Protein GI | 99081015 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.313461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.325282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTTC AGGGCGTTCG ACTGGATGGA TGTGTCACAC AAATGAAGAA GCAAGGTCTC
GACGCGACAG AAATTCGGAT CCTGAGCGCC GTGCAGCAAC ACGGCCAACT GAGCAAGACC
CGGCTTGCGG AGCTTGTGAA CCTCTCGCCC ACTCCCTGTT GGGCGCGCCT GGTACGGCTC
AAGGCCGCTG GCTATATTCG CGGCTATCAT GCCGAATTGG CACTCGACCG GATCATTGAT
TTTACCCAAG TGGTCGTCAC CATCTCGCTC ACCCATCACC GCAAGACGGA TTTTGACAGG
TTTGAAACCT ACATCCGCGG ACTTGATGAA GTGATCGACT GTGTCGCCAC CGGAGGTGGC
ATGGATTATG TCATGAAGGT CGCCACCCCC ACGCTTGCCG CCTTTCAGAG CCTCATGGAT
GAGATGCTCT CGGCCGAGCT CTCCATCGAT CGCTACATGA CCTACATCGC GACTCGTCAG
ATCAAGACGA GCCGCCCGAA CCTCGCGAAA CTGGTCGCCA AAAGCGAGAA ATGA
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| Protein sequence | MILQGVRLDG CVTQMKKQGL DATEIRILSA VQQHGQLSKT RLAELVNLSP TPCWARLVRL
KAAGYIRGYH AELALDRIID FTQVVVTISL THHRKTDFDR FETYIRGLDE VIDCVATGGG
MDYVMKVATP TLAAFQSLMD EMLSAELSID RYMTYIATRQ IKTSRPNLAK LVAKSEK
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