Gene TM1040_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1167 
Symbol 
ID4075953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1255924 
End bp1256397 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content64% 
IMG OID638006472 
Productdisulphide bond formation protein DsbB 
Protein accessionYP_613162 
Protein GI99081008 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.022846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCA GCCGATTTCT CGTCCTGCTC GCGGCCGGTG GCTCTGCCGC CTTGCTGCTG 
GGCGCCTTTG CGTTTCAATA CATTGGCGAG CTTGCGCCCT GCAAACTCTG CATCTGGCAG
CGCTACCCTC ACGGCGCAGC AGTTGGCGTC GGCGCGCTGG CGTTGCTCAT TCCCGGCGCG
GTGCTGCCCT ATCTCGGCGC GGTGGCCGCA CTCGCCACCT CGGCGATTGG GGCCTTTCAC
GCGGGTGTCG AACAAGGTTG GTGGGAAGGC CCCTCCACCT GCACCTCTGG CGCGATCGAA
AGCCTCAGCG CAGATGAGCT GATGTCGCAG ATCATGTCGG CACCGCTTGT CCGCTGTGAC
GACATCCCCT GGGAGATGCT CGGCCTCTCC ATGGCAGGCT GGAACGCGGT GATCTCGCTC
GGATTGGCTG CGCTTTGGTT TGCAGCTGCG CGTCACGCGC GCAAAAACGC CTGA
 
Protein sequence
MTFSRFLVLL AAGGSAALLL GAFAFQYIGE LAPCKLCIWQ RYPHGAAVGV GALALLIPGA 
VLPYLGAVAA LATSAIGAFH AGVEQGWWEG PSTCTSGAIE SLSADELMSQ IMSAPLVRCD
DIPWEMLGLS MAGWNAVISL GLAALWFAAA RHARKNA