| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1139 |
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| Symbol | |
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| ID | 4078435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1225301 |
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| End bp | 1226005 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638006443 |
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| Product | uracil-DNA glycosylase |
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| Protein accession | YP_613134 |
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| Protein GI | 99080980 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0692] Uracil DNA glycosylase |
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| TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.689072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCGC AAGACCACGC CTCAGCCCTG CGGCCTGCGG TCGGGGGCTG GGCGGAGCTG
CCCTTCTTTG AAACCCACTG GCCCCGGATC GAGGCAGCGC TTGCACAGGA GACGCGCCAG
ATCCTGCCCC CTGCGCATCA GCGCTTTGCC GCGCTGGAGC GTACCCCGCC CGAGTCCACC
CGCGTGGTGA TCCTTGGTCA GGACCCCTAT CCGACGCCGG GCCATGCGCA TGGGCTGTCG
TTTTCCGTTG AACCGGATGT GACGCCCCTG CCCCGGTCCT TGCGCAACAT CTATCAGGAA
ATGCGCGACG ATCTCGGCAC CTGCCCGGAA ACCGGCGATC TGCGCCCCTG GGCGGCGCAG
GGTGTGCTCC TGCTCAATAC GGTGCTGTCG GTCCCCGCAG GCGAGGCCAA CGGCCACAAA
TCGCTGGGCT GGCAAGAGCT GGCCCATCAG GTGCTCGACC TCAGTTCGCG CCGCCCCACG
GCCTATGTGC TCTGGGGCAA TCAGGCGCAG AAGCTCGAAA GCCACATTCG TCCCGGCGAT
CACCTGATCG TCAAGACGGC CCATCCTTCA CCGCTGTCGG CACGCCGGGG CTTTTTCGGC
TCGCGCGTGT TCTCGGCGAT CAACGACTGG CTCACCGCGC GCGGCGAGCC GCCGATCACG
TGGGCAGACC CACGTCCAGC CCAAGGGAGC ATCTTCGATG TCTGA
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| Protein sequence | MAPQDHASAL RPAVGGWAEL PFFETHWPRI EAALAQETRQ ILPPAHQRFA ALERTPPEST
RVVILGQDPY PTPGHAHGLS FSVEPDVTPL PRSLRNIYQE MRDDLGTCPE TGDLRPWAAQ
GVLLLNTVLS VPAGEANGHK SLGWQELAHQ VLDLSSRRPT AYVLWGNQAQ KLESHIRPGD
HLIVKTAHPS PLSARRGFFG SRVFSAINDW LTARGEPPIT WADPRPAQGS IFDV
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