Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1129 |
Symbol | |
ID | 4077250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1214188 |
End bp | 1214706 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638006433 |
Product | hypothetical protein |
Protein accession | YP_613124 |
Protein GI | 99080970 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGG ATGTGATCCG TCTGACCATT CCTGATGTGT CGGATTTTGC CAAACATTTA CGCCGCGCGT TTGCGCAGGC GCCCGGCCAT GTGGAAATGC TGAACCATGT GGCCCGCGCA GCGGGGTATC GCAATTTTCA GCATCTGCGC CAACAGAACC CGCCATCACC CGAGATCGAC CATAAGCGTA TCGCGCGCGC GGCGCGCTAT TTCGATGCGC AGGCGCGCTG GCAGAGCTGG CCGACCAAAC GCGGTGTGCG AGAGCTGTGT CTTTGGGTGA TCTGGGCGCG TCTGCCGTCG CGGACCTACT TCAGCGAGCG GGAGATTTCG GCCGTCATTG ACGAACACTG CGTGTTTCGC GATGCCGCAC AGATCCGCCG GAGCCTGATT GAGATGGGGC TTTTGCGTCG CAACCGGGAT GGATCTGATT ATCAGCGGGT CGAGACGGCG ATGGACCCGC ATGGGGCTGC GCTGATGTCT TTGCTCGCCG AGCGGCAAAA AGCGCAAGAA AATCCCTAA
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Protein sequence | MSKDVIRLTI PDVSDFAKHL RRAFAQAPGH VEMLNHVARA AGYRNFQHLR QQNPPSPEID HKRIARAARY FDAQARWQSW PTKRGVRELC LWVIWARLPS RTYFSEREIS AVIDEHCVFR DAAQIRRSLI EMGLLRRNRD GSDYQRVETA MDPHGAALMS LLAERQKAQE NP
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