| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1122 |
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| Symbol | |
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| ID | 4077243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1207757 |
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| End bp | 1208566 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006426 |
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| Product | glutamate racemase |
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| Protein accession | YP_613117 |
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| Protein GI | 99080963 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0796] Glutamate racemase |
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| TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.742297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTTG GTATTTTTGA TTCCGGTCTT GGTGGTCTGA CCGTGTTGGA TGCGGCGCAA
AAGCGCCTGC CGGATGTGGA TTTCCTGTAT TACGGCGACA ACAGCCATGC GCCTTACGGC
GTGCGCGACG CCGAGGACAT CTATGAGCTG ACGCATAAGG CCGTGCATGA CATGTGGGAT
CGCGGCTGCA ATCTGGTGAT CCTGGCCTGT AATACCGCCT CGGCCGCTGC GCTGCGGCGC
ATGCAGGAGG CCGGCGTGCC AGAGGGCAAG CGGGTGCTTG GCGTCTTTGT GCCGCTGATC
GAGGCGCTCA CCGAACGCCA GTGGGGGGAC AACTCTCCTC CGCGGGAGGT GGCCGTGAAA
CATGTGGCGC TGTTTGCGAC CCCTGCCACC GTGGCAAGCC GCGCATTTCA GCGCGAGCTG
GCGTTTCGCG CCATCGGCGT CGACGTCGAA GCGCAGGCCT GCGGTGGCGT GGTCGATGCC
ATCGAGGAGG GCGACATGAT CCTCGCCGAG GCGCTTGTGA AAAGCCATGT CGATGCGCTG
CTGCGCAAGA TGCCCCGCCC CGAGGCGGCG ATCCTGGGCT GCACCCATTA TCCGTTGATG
GAAGACGTCT TTCAAAAGGC GCTGGGGCCC GATGTGCAGG TCTTCAGCCA GGGCCGTCTG
GTTGCCGACA GCCTCGCGCA CTATCTCGAG CGTCGTCCCG AGATGATTGG TGGCGGCAAT
GCGGGCTATG TGACCACCGG GAATGCCAAC CGCGTCAGCA GCCGCGCGAC GCAATTCTTG
CGACGAGAAA TCACTTTTGA AGCGGCCTGA
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| Protein sequence | MAVGIFDSGL GGLTVLDAAQ KRLPDVDFLY YGDNSHAPYG VRDAEDIYEL THKAVHDMWD
RGCNLVILAC NTASAAALRR MQEAGVPEGK RVLGVFVPLI EALTERQWGD NSPPREVAVK
HVALFATPAT VASRAFQREL AFRAIGVDVE AQACGGVVDA IEEGDMILAE ALVKSHVDAL
LRKMPRPEAA ILGCTHYPLM EDVFQKALGP DVQVFSQGRL VADSLAHYLE RRPEMIGGGN
AGYVTTGNAN RVSSRATQFL RREITFEAA
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