| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1119 |
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| Symbol | |
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| ID | 4077240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1202216 |
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| End bp | 1203121 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006423 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_613114 |
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| Protein GI | 99080960 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGGG ACAAGCTCAG GATCTTTCAC GCGGTTGCGG ATGCAGGCAG CCTGACCCAT
GCGGGCGAAC ACCTCAACCT GTCCCAATCG GCTGTTTCGC GGCAGATTCG GGGTCTTGAG
GAGAGCCTGA ACGCCACGCT TTTTCACCGG CACGCGCGGG GGCTGATTCT CACCGAACAG
GGCGAGCTGC TGTTTGACGC CACCAAAACG ATGTCAAAAC GTCTGGAAAC CGCCTCGGCG
CGGATTCGCG ACAGCGAAGA AGGCGTCTTT GGCGAGTTGC GCGTCACCAC CACCACCGGA
TTTGGCACGC TCTGGCTCGC GCCGCGTCTC ATCAAGCTCT ACGAGCAGTA TCCCAACCTC
AAAGTGGACC TGATGCTCGA AGAGCGGGTG CTGGATCTGC CCATGCGCGA GGCCGATGTG
GCGATCCGCA TGAAAGAGCC AAGCCAGGCC GATCTCATTC GCAAACGCCT GATGACCGTG
CAGATGCGCC TCTATGCGTC CCGCGGCTAT ATCGACAAAT TTGGCTGGCC CGAAACCATC
GAGGAAATCC GCGATCACCG CCTGATCTGC CAGAGCCTGC GTTCGGCGCA AGTCGGGTCC
GCTGCGGTCA TGGTGCAAAA GCTGATGACC CATAACCCCA AATCCATGCT CACGGTGAAC
AACTATTTCG GCGTGTTACA GGGGGTTTTG CAGGATCTCG GCATCGGGGT TCTGCCGGAT
TACGTGACCG AGGATTTCCC GGATCTGGTG CAGGTTTTGC CCAATGAGGA CACCAATGGT
GTGCCGGTTT ATCTCGCCTA TCCAGAAGAA TTGCGCCACT CGCAGCGGGT CTCCGCCTTC
CGAGACTTTG TGCAGAATGA GATCATCGCA CACCGTAAGC ACATGAAAGA GCTTGGGAAA
ATATAA
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| Protein sequence | MDWDKLRIFH AVADAGSLTH AGEHLNLSQS AVSRQIRGLE ESLNATLFHR HARGLILTEQ
GELLFDATKT MSKRLETASA RIRDSEEGVF GELRVTTTTG FGTLWLAPRL IKLYEQYPNL
KVDLMLEERV LDLPMREADV AIRMKEPSQA DLIRKRLMTV QMRLYASRGY IDKFGWPETI
EEIRDHRLIC QSLRSAQVGS AAVMVQKLMT HNPKSMLTVN NYFGVLQGVL QDLGIGVLPD
YVTEDFPDLV QVLPNEDTNG VPVYLAYPEE LRHSQRVSAF RDFVQNEIIA HRKHMKELGK
I
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