| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1113 |
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| Symbol | |
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| ID | 4077820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1194349 |
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| End bp | 1196370 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006417 |
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| Product | transketolase |
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| Protein accession | YP_613108 |
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| Protein GI | 99080954 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCTGA CAGCCCTGCG CTCTGAAAAC CCCGATCATT GGAACAAAGC CGCCGCCATC
CGCGCCCTGA CGCTGGATGC GGTTGCGGGT GCAAACTCCG GCCACTCCGG CATGCCGATT
GGCATGGCCG ATGTCGCAAC CGTGCTGTTT GAAAAGCACA TGAAGTTCGA CGTCTCCGCC
CCCAAATGGG CGGACCGCGA TCGCTTCATC CTGTCGGCCG GCCACGGCTC CATGCTGATC
TATTCGCTGC TCTACCTCAT GGGCGACGCA CAGGTCACGC TCGAGCAGAT CAAGAACTTC
CGTCAGTCCG GCGCGCTCAC GGCGGGCCAC CCGGAGAACT TTCTTCTGGA CGCGGTCGAA
GTCACCACCG GCCCGCTTGG CCAGGGGATC TCGAACGCTG TCGGCTTTGC CATGGCCGAG
GAAAGCCTGC GCGCCCAGTA TGGCAAGAAG GTTGTCGATC ACTACACCTA TGTCATCGCG
GGCGACGGCT GCCTCATGGA AGGCGTGAGC CAGGAGGCAA TCGGCCTTGC CGGGCGTCAC
CAGCTGGGCA AGCTCGTGGT GTTCTGGGAC AACAACAACA TCACCATCGA CGGCACCGTT
GATCTCTCTG ATCGCACCAA TCAGGTGCAG CGCTTCAAAG CGTCCGGTTG GCATGTGCAG
GAAATCGACG GCCATAACCC GGCCGAGATC GACGCCGCCA TCGAGGCCGC GAAGAAGACC
AAGAAACCGT CGATGATCGC CTGCAAAACC CATATCGCTC TGGGTCACGC TGCGCAGGAT
ACCTCCAAAG GCCACGGCGC TCTGACCGAC GCCGATCAGC TCAAAGCCGC CAAGGAAGCC
TATGGCTGGA CCGGTGGCGC CTATGAGGTG CCCGCCGAGA TCAAATCCCA GTGGGAAGCG
ATCGGCCAGC GCGGTGCTAC GGCGCGCGCT GAATGGGAAG CGCGTTTTGC CGAGATTTCC
AAGCAGAAAC AGGACCGGTT CAACCGGGCC TTTGCCCTTG AGGCGCCGAA GAAGCTCTCC
GCGACCGTGA AGGCGCTGAA AAAGCAGATC TCGGAAACCA AACCCAAGGT GGCAACCCGC
AAGGCGTCGG AAATGGCGCT TGAGGTCATC AACCCGATCA TGCCCGAAAC CATTGGCGGC
TCGGCGGATC TCACCGGCTC CAACAACACC AAGACCGGCG ATCTTGGGGT GTTTGACACC
GACAACCGCA AGGGCCGCTA TGTCTATTGG GGCATCCGCG AGCATGGTAT GGCGGCAGCG
ATGAACGGCA TGGCGCTGCA TGGCGGTATT CGCCCCTATG GCGGGACGTT CTTCTGCTTT
ACCGATTATG CGCGTCCGGC CATGCGTCTG GCGGCCCTGT CGAAGATCCC GACGGTCTTT
GTGATGACCC ACGATTCCAT CGGTGTGGGC GAAGATGGCC CGACCCACCA GCCGGTCGAG
CATCTCGCGA TCTGTCGCGC GACCCCGAAC ACCTATACCT TCCGCCCTGC CGACGCGGTG
GAAACCGCAG AAGCCTGGGA AATCGCGCTG ACGGCCAAGG AAACCCCGTC GGTGATCGCG
CTCACGCGTC AGGGCCTGCC CACCGTGCGC ACCGAGCACA AGCTGGCCAA CCTCACCGAG
AAAGGCGCCT ATGTGCTGGC CGAGGCCGAG AGCAAGCGTC AGGTGATCCT GATGGCTTCC
GGCTCCGAAG TGTCGGTTGC GATGGCTGCA AAAGACATCC TCGAGGGTCA AGGCATCGGC
ACCCGCGTGG TCTCTGTGCC CTGCATGGAG CTGTTCCACG CGCAGGACGA AGCCTACCGC
CGCAAGGTTC TGCCCGCAGG TCCCGTGCGC GTGGCCATCG AGGCCGCCGT GCGCGATGGC
GGCTGGGATC GCCTCTTGCT GGGGGAACGC GGCCAGGAGA AGAAGGCAGG CTTTGTCGGC
ATGCAGGGCT TTGGTGCTTC TGCCCCGGCG GGTGAGCTCT TTGAGAAATT CGGCATTACC
GCCGAAGGCA CCGTCGCCAA GGTCAAAGAG CTGTTGGGCT AA
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| Protein sequence | MDLTALRSEN PDHWNKAAAI RALTLDAVAG ANSGHSGMPI GMADVATVLF EKHMKFDVSA
PKWADRDRFI LSAGHGSMLI YSLLYLMGDA QVTLEQIKNF RQSGALTAGH PENFLLDAVE
VTTGPLGQGI SNAVGFAMAE ESLRAQYGKK VVDHYTYVIA GDGCLMEGVS QEAIGLAGRH
QLGKLVVFWD NNNITIDGTV DLSDRTNQVQ RFKASGWHVQ EIDGHNPAEI DAAIEAAKKT
KKPSMIACKT HIALGHAAQD TSKGHGALTD ADQLKAAKEA YGWTGGAYEV PAEIKSQWEA
IGQRGATARA EWEARFAEIS KQKQDRFNRA FALEAPKKLS ATVKALKKQI SETKPKVATR
KASEMALEVI NPIMPETIGG SADLTGSNNT KTGDLGVFDT DNRKGRYVYW GIREHGMAAA
MNGMALHGGI RPYGGTFFCF TDYARPAMRL AALSKIPTVF VMTHDSIGVG EDGPTHQPVE
HLAICRATPN TYTFRPADAV ETAEAWEIAL TAKETPSVIA LTRQGLPTVR TEHKLANLTE
KGAYVLAEAE SKRQVILMAS GSEVSVAMAA KDILEGQGIG TRVVSVPCME LFHAQDEAYR
RKVLPAGPVR VAIEAAVRDG GWDRLLLGER GQEKKAGFVG MQGFGASAPA GELFEKFGIT
AEGTVAKVKE LLG
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