| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1107 |
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| Symbol | |
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| ID | 4077814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1189708 |
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| End bp | 1190604 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006411 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_613102 |
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| Protein GI | 99080948 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCCC AATGGGACGA TATGAAAGTG TTTTTGGCGG TCGCGCGGGA GAGCAGCCTC
TCTGGCGCGG GGCGGGTCCT CAAGATGGAC CCTGCCACAG TGGGCCGCCG GGTGGCCCGG
TTTGAGGCCG CGCTCAAGAC ATCTCTCTTT GTAAAATCAC CGCAAGGCTA TGCGCTGAGC
GCGGCCGGAG ACAGGCTCTT GGGGCATGCG GAAGCGGCGG AACTCGCCAT GCGGGCGGGC
GAAGAGGCGC TCACTGGCCC GAGTGACACG CTTTCGGGGC AGATCCGCAT CGGCGCGCCG
GATGGATGTG CCAACTACAT CCTGCCGCAG GTCTGTGCCG CGATTTCCAA AGACAACCCG
GATCTTGATA TTCAGGTTGT CGCCTTGCCG CGTGTGATCA ACCTGTCGCG GCGCGAGGCG
GATATGGCCG TCACCGTCAG CGCGCCAACT GCGGGCAAGC TGCTGGTGCA AAAGATCACC
GATTATCACC TGCATCTGGC GGCCACCCGC CACTATCTGC GCGACAATCA CCCGATCGAA
AAGCTCGAGC ACCTGCGCGA CCATCGCATG ATCGGCTACA TTCCGGACAT GATCTTTGAT
CGCGAGTTGG ATTACCTCAA TGATCTGGGC ATCGAGCGCG TGTCGCTGGC GTCCAATTCG
GTCTCTGTCC AGATCAAGAT GCTTGCCGAA GGCAGCGCGC TTGGCGTGGT GCATGATTTT
TCACTGCCGA GCCACCGGAC CCTGCGCAAA GTGCTGAAGG AAGAGTTCAG CCTGACCCGC
AGTTTTTACC TTGTCCGCCA TCAGGGCGAC CAGCGCAGCG ACCGGCTTAA TCGCTTTGCA
GAGGCGCTCT CGGCGGGGAT ACGCGCAGAG GTTGAGCGAT TGGAAGGCTT GACTTGA
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| Protein sequence | MEPQWDDMKV FLAVARESSL SGAGRVLKMD PATVGRRVAR FEAALKTSLF VKSPQGYALS
AAGDRLLGHA EAAELAMRAG EEALTGPSDT LSGQIRIGAP DGCANYILPQ VCAAISKDNP
DLDIQVVALP RVINLSRREA DMAVTVSAPT AGKLLVQKIT DYHLHLAATR HYLRDNHPIE
KLEHLRDHRM IGYIPDMIFD RELDYLNDLG IERVSLASNS VSVQIKMLAE GSALGVVHDF
SLPSHRTLRK VLKEEFSLTR SFYLVRHQGD QRSDRLNRFA EALSAGIRAE VERLEGLT
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