| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1097 |
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| Symbol | |
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| ID | 4077804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1176282 |
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| End bp | 1177466 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638006401 |
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| Product | major facilitator transporter |
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| Protein accession | YP_613092 |
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| Protein GI | 99080938 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGC AGGGGCAGGG GACGAACTGG GTCATGGTGC TCTTGATCTG GGCCGCGGGC
CTCGGCGCGG CGGCGCAATA CGGCAAGATC GCCGTGATCT TTGACCAGCT GCCTGCGCTT
TATCCCGGTG TGGGCGCGGC GATGGGCTGG ACGGTGTCGC TGGTGGGGGT GCTGGGGATC
ATTTTTGGCG TTGTGGCGGG GCTTTATGTG TCGGCCATCG GTTTTCGGCG TACGCTTGTT
CTGTCGCTGG TGCTTGGCGC GGGGGTCTCG GGCCTGCAGG CGCTGCATCT GCCCTTTGGC
CTGTTTCTCA TCACGCGCAT GGTCGAGGGG ATCTCCCATC TGGGCGTGGT TGTTGCGGCG
CCGACGCTGA TGGCGATCCT CGCGCGTGGC CCGGCGCGTG GGGTGGCGCT GACGATCTGG
AGTACGTTCT TTGGCGTTGC CTTTGCGCTC TTGACGTGGT TCGGGCTGCC GCTCGTCGAG
GCACGGGGCA TCCCTGCGCT TTTTGCGGTG CATGCGGGGA TGATGGGCCT TCTGGCGCTC
ATCCTGCATT GGGGGCTGCG CGACTTGCCG GTGCCGCCGC GCGCCAGCTA TCCTGATCTG
CGCGCCTTGC CATCGCTGCA TCTGAATATC TACCGATCGC CGCACAAGCT GGCGCCTGCC
GCGGGCTGGC TCTTTTATAC CTGCTGCTTT GTGGCGGTGC TGACGGTGCT GCCGCCCTAT
ATCGCCGAGA GCCAGCGTGC GCATGTGATG GGGGCGATGC CTCTGGTGTC GATCGTGGTC
TCTCTGACGC TTGGGGCTGG CCTGCTGCGC GTGACCTCGG GGGTCAAAGT GGTGCAGCTT
GGGTTCCTCA TCGGCACGGT GGCGATGCTC TGGCTTTGGG CGATGCCGGG GTACTGGCTG
GCCTGCATGG TCTTGGCGGC GGGGTTCGGG CTGGTGCAGG GGGCCAGCTT TGCTTCTGTG
CCGCAGCTCA ATGACACGCC TTCGACGCAA TCAGAGGCCA ATGGCGCCAT GGCGCAGGCG
GGCAACATGG GCAATGCCAT CGGCACACCG CTGTTTGTCG CCGTGCTGAC CTATGGGGGC
TATGGCTCGC TGGTGCTGAC CGTGGCGCTG CTGCTTTTGG CCGGGGCCGT GGTGCATCAG
GCGCTTGCGC TGCACCGGCA ACGGGTGGCG CGGGGGGCGG TCTGA
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| Protein sequence | MQQQGQGTNW VMVLLIWAAG LGAAAQYGKI AVIFDQLPAL YPGVGAAMGW TVSLVGVLGI
IFGVVAGLYV SAIGFRRTLV LSLVLGAGVS GLQALHLPFG LFLITRMVEG ISHLGVVVAA
PTLMAILARG PARGVALTIW STFFGVAFAL LTWFGLPLVE ARGIPALFAV HAGMMGLLAL
ILHWGLRDLP VPPRASYPDL RALPSLHLNI YRSPHKLAPA AGWLFYTCCF VAVLTVLPPY
IAESQRAHVM GAMPLVSIVV SLTLGAGLLR VTSGVKVVQL GFLIGTVAML WLWAMPGYWL
ACMVLAAGFG LVQGASFASV PQLNDTPSTQ SEANGAMAQA GNMGNAIGTP LFVAVLTYGG
YGSLVLTVAL LLLAGAVVHQ ALALHRQRVA RGAV
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