Gene TM1040_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1066 
Symbol 
ID4077206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1142902 
End bp1143225 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content65% 
IMG OID638006370 
Producthypothetical protein 
Protein accessionYP_613061 
Protein GI99080907 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.131086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACC CCTACCGAGG CGAAGTGACG CTGGTGCTCA ACGGCCAGCC GCAGGTGCTG 
AAGCTGACAC TGGGTGCGCT GGCAGAACTG GAGGCGGAGC TGGGCGAGGG TGACCTTATT
TCCCTGGTGC AACGCTTTGA AAGCGAGAGA TTTTCCTCGC GCGATATGCT GGCGCTCTTG
GCGGCAGGGC TGCGCGGGGG CGGGTCTGAG ATCAGCCGCG CAGATCTGGC GCAGGCCGAG
ATCGAGGGCG GCGTGATGCA GGCCACCAGG GTTGCCGCGC AATTGCTGGC GCTGAGTTTT
GCGCTGCCGA CGGAGGACGC ATGA
 
Protein sequence
MANPYRGEVT LVLNGQPQVL KLTLGALAEL EAELGEGDLI SLVQRFESER FSSRDMLALL 
AAGLRGGGSE ISRADLAQAE IEGGVMQATR VAAQLLALSF ALPTEDA