| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1055 |
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| Symbol | |
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| ID | 4078113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1134335 |
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| End bp | 1135489 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006359 |
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| Product | aminodeoxychorismate lyase |
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| Protein accession | YP_613050 |
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| Protein GI | 99080896 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.921254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.096534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCGCA GTCTGGCCTC GAACATGCTG ACGATCCTGA TCGTCGGCCT GTTTCTCTTC
GCGGGGGTGA TCCTGTGGGG CAAGAATGAA TACACCGCCG AGGGCCCCCT GTCCGAAGCG
ATCTGTTTTC AGGTGCCCTC GGGGACCAAT ATGGCACGGG TGTCGCGCCG TCTTGAAAGC
GACGGCGTGG TCTCGAGCGG CACCATCTTT CGCATCGGGG TGAAATATTC CGACAAGGCG
CAGGACCTCA AGGCAGGCAG CTACCTTGTG GAGCCCGGCG CTTCGATGGA AGGGATCGTG
GATCAGATCA CCCGGGGCGG GGCCTCCACC TGTGGCACCG AGATCGTCTA TCGCGTTGGC
GTGACCCGCG TGCTGGCCGA GGTGCGCGAG CTGGACCCGG CGACCAACGC CTTTGTGGAA
CGTGCTGAAT TTGTCCCCGG CGTGGATGAG ACCCCCGCGG TCTATACCGA GAAAAAATCC
GAGGCTGACA CGCGCTACCG TATTGCACTG GCAGAAGGCG TGACCAGCTG GCAGGTGGTC
GAGTCCCTGA AGGCGATGGA CATTCTCGAG GGGGAGCCGG GCCGCCGTCC GCCGGAGGGC
AGCCTTGCGC CCGACAGCTA CGAGGTCCGC CCCGGAACCT CGCGCGAGGC GGTGCTGGCC
GAGATGCAGG CGCGGCAAGA CAGGCGGATC GCGGACGCCT GGGAAGCCCG TAGCCCCGAT
GCGGCTGTCA AAACCCCAGA GGAAATGCTG ATCCTCGCCT CGATCATCGA GAAGGAAACC
GGCGTTGCTG AGGAACGCGG TGTGGTGGCC TCTGTCTTCA CCAACCGCCT GCGGCGCGGC
ATGCGCCTTC AGACCGACCC CACGGTGATC TATGGTGTGA CCAAGGGAGA GGGCGTTCTG
GGCCGGGGCC TACGGCAGAG CGAGCTGCGC GGCGCAACGC CGTGGAACAC GTATGTGATC
GAAGGTCTTC CACCAACACC CATCGCCAAT CCCGGGCTTG AAAGCCTGGT GGCGGCAGTG
AACCCGGATC AGACTGACTA TGTGTTCTTT GTGGCCGATG GCACCGGCGG CCATGCTTTT
GCCGAAACGC TCGAAGAGCA CAATCGCAAC GTCGCGAAAT GGCGAAAGAT CGAAGCCGAG
CGCAACAACA ACTGA
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| Protein sequence | MWRSLASNML TILIVGLFLF AGVILWGKNE YTAEGPLSEA ICFQVPSGTN MARVSRRLES
DGVVSSGTIF RIGVKYSDKA QDLKAGSYLV EPGASMEGIV DQITRGGAST CGTEIVYRVG
VTRVLAEVRE LDPATNAFVE RAEFVPGVDE TPAVYTEKKS EADTRYRIAL AEGVTSWQVV
ESLKAMDILE GEPGRRPPEG SLAPDSYEVR PGTSREAVLA EMQARQDRRI ADAWEARSPD
AAVKTPEEML ILASIIEKET GVAEERGVVA SVFTNRLRRG MRLQTDPTVI YGVTKGEGVL
GRGLRQSELR GATPWNTYVI EGLPPTPIAN PGLESLVAAV NPDQTDYVFF VADGTGGHAF
AETLEEHNRN VAKWRKIEAE RNNN
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