Gene TM1040_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1041 
Symbol 
ID4078099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1122288 
End bp1122662 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content55% 
IMG OID638006345 
Producthypothetical protein 
Protein accessionYP_613036 
Protein GI99080882 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.635396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.160086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGA ATGTGCAGCG CTACCGTTGT GGAAGCTGTA AAAAGACCTT CAGTGGACGC 
ACTGGCACAC GGATTGCGCG CATTCATCGG CCAGGGCTGT TCTTCGATGT GTTGAAGGAT
ATGCCGGGGC CACGCCCGCT ATCATCCGTT CGCGTGCTGG CAAGATGCCT TGGTCTCAAC
AAACACACAG TATGGCGCTG GCGTTTGATT GCACTCTCCG CTCTTTCTGG CACATCCGAT
ACGGACTTTT CAGGCATCGT TGAGGCCGAC GAAACATACC AGAGGGAATC CCGCAAAGGC
AGTCGTGAGT GGATCAGACA TCAGCGCGAT CCTCTCGACG ACTCCAAGCC TCCTAGAATG
CGCTGGTATG AATAG
 
Protein sequence
MRTNVQRYRC GSCKKTFSGR TGTRIARIHR PGLFFDVLKD MPGPRPLSSV RVLARCLGLN 
KHTVWRWRLI ALSALSGTSD TDFSGIVEAD ETYQRESRKG SREWIRHQRD PLDDSKPPRM
RWYE