| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1019 |
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| Symbol | |
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| ID | 4078531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1090440 |
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| End bp | 1091252 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006323 |
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| Product | hypothetical protein |
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| Protein accession | YP_613014 |
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| Protein GI | 99080860 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.658652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTTT CCCGTCTCGC CGCCCTTGGT CTTGTGACCT GCCTTGCCGT TGCCACCCCC
GAGGTCGTGC GCGCCGCGAG TTGTGGCAAC ACCGCCGCGG GGTTTGAAGC CTGGAAGGCC
GATTTTGCGC GCACGGCCAA ACGGGCCGGG GTCCGTCAGG CCGGGCTCAA CGCGCTGGCG
CAAACCCGAT ATGCCACCGG CACCATCGCC GCCGACCGCA ATCAGAAGAG CTTTCGCTAT
AGTCTTGAGA AGTTCATGCA GGTGCGCGGC GCGACAACCA TCGTGGCACA GGGCCGCCGT
CACAAGGCCC GCAATGCAGA GTTCTTTGCC GCGCTTGAGC GCAAATATGG CGTGCCGGCG
GGGCTGTTGA TCGCCATTCA TGGCATGGAG ACCGCCTTTG GCAATTATAT GGGCGACAGT
CAGGTGGTGT CGTCGATTGT GACCCTCACC TATGACTGCC GCCGCTCGGA GTTTTTTGAA
CCCCACGCCA TCGGCGCGCT CAAGCTCGTG GATCAGGGTG CGATCTCGAT GGCCACCAAA
GGTGCGAAAC ACGGGGAGCT GGGCCACACG CAGTTTCTGC CAGGCAACGC ACTGAAATAT
GGTCAGGACT GGAACCGCGA CGGGCGGGTG GATTTCTACG ACATGGGCGA CGCACTCGCC
TCTACCGCGC ATTTCCTGCG TCAAAAAGGC TGGCGGCCGG GCAAAGGCTA TCAGCAGGGC
GAGCCCAACT ACAAAGTGCT CAAACAATGG AATGCCGCCA CCGTGTACCA GCAGTCCCTC
GCCATCATGG GCCGGCAGAT CGACGGCTCC TGA
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| Protein sequence | MLFSRLAALG LVTCLAVATP EVVRAASCGN TAAGFEAWKA DFARTAKRAG VRQAGLNALA
QTRYATGTIA ADRNQKSFRY SLEKFMQVRG ATTIVAQGRR HKARNAEFFA ALERKYGVPA
GLLIAIHGME TAFGNYMGDS QVVSSIVTLT YDCRRSEFFE PHAIGALKLV DQGAISMATK
GAKHGELGHT QFLPGNALKY GQDWNRDGRV DFYDMGDALA STAHFLRQKG WRPGKGYQQG
EPNYKVLKQW NAATVYQQSL AIMGRQIDGS
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