| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1015 |
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| Symbol | |
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| ID | 4078235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1085908 |
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| End bp | 1086813 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638006319 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_613010 |
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| Protein GI | 99080856 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3021] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.382783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTGC GCAGATGGGC ACGGATGGGG CTCTGGGGAG GCTTGGCACT GAGCATGCTG
GCGCTTTCTG GGGGCTACCT TGGTGCGCTG CATCCCCTTG GCGATAGTCT TGCGGTCTTT
CGCGTGCCCT TCGCCGGGGG GGCGATCGTT TTTGCCTTCT TGCTGCGCCA CGACGTGCGC
GCGGCGCTGT TCGGTCTCTT GGCGAGTGTT GGGATGCTGG GGATGTGGCT CGGTCACTCC
GGCGGGGGGC AGGATCTTAC CGCGCCAGAG CTCACGCTCT ATCAGCAGAA CCTGCTCTGG
CGAAACGCAG GCAATGCGCG TCTTGTAGCG GCCATTCGGG ACTCCGGTGC GGATCTGGTG
ACGCTGGAGG AGGTCTCGGA CCAGAACCTG CCCATTCTTC AGAGCCTGCA GCCAGATTAC
CCGGTGCAGC ATGTCTGCGC GTTTCGCAAG GTTGGTCGGG TGGCCGTGCT GGCGCGCGGG
CTGCGCGCGA CCCAGCGGCT GACCTGCGCC GAAGACCTCG GGCTGGCCGC CATGGAGGTC
GAGGGACCGA AGGGGCGTTT CTGGGTGGCA GCCCTGCATC TGCCCTGGCC CTGGCCGCAC
GAGCAGGCCG CTCATGTGGA GCGCATTGTG GCGGAGCTGA CTGCGCTTGA GGGGCCAATG
ATCCTTGCCG GGGACTTCAA CGCCGTGGCC TGGTCTCACA CGGTGAAACG CATCGGGGCT
GCGGGGGGCA TGGCGCGGGT TGGTCCCTAT GGGGCGACCT TTGAGCTGCC CCCGCTCGGC
TACCCTATCG GGATCGATCA TGTGCTTGCG CCCAAGGGCC TCGGCGTCAT CGAAAGACAG
CCCAAGCTGG CGTCGGATCA TCACGGGCTT CTGGCCCGCC TGCCATGGCC GGAGGCGCAG
GACTGA
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| Protein sequence | MRLRRWARMG LWGGLALSML ALSGGYLGAL HPLGDSLAVF RVPFAGGAIV FAFLLRHDVR
AALFGLLASV GMLGMWLGHS GGGQDLTAPE LTLYQQNLLW RNAGNARLVA AIRDSGADLV
TLEEVSDQNL PILQSLQPDY PVQHVCAFRK VGRVAVLARG LRATQRLTCA EDLGLAAMEV
EGPKGRFWVA ALHLPWPWPH EQAAHVERIV AELTALEGPM ILAGDFNAVA WSHTVKRIGA
AGGMARVGPY GATFELPPLG YPIGIDHVLA PKGLGVIERQ PKLASDHHGL LARLPWPEAQ
D
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