Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0998 |
Symbol | |
ID | 4078218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1070995 |
End bp | 1071348 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638006302 |
Product | hypothetical protein |
Protein accession | YP_612993 |
Protein GI | 99080839 |
COG category | [S] Function unknown |
COG ID | [COG3737] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.132286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTTA ACGAAGTGGT TTATTCGGAT GCTTTGCCCA TTGATGGCTA TGGGCCGGGT TTCTTTCGCG TCGGCGGAGA AATCAAGGAA GGGGCCATGT TGACCGGGGC CAAGGGCACG TCCGCGTGGG GGGGCTATGA GGACGCTGAA CCGCTCTTGG CGTTGGCGGG GGAGGTGGAT GTTCTGTTCA TCGGCACCGG GGCAGAGATT GCGCATATTC CAGGCGCCTT GCGACAGGCG CTTGAGGCAG AGGGGCTGGG CGTTGAGGTG ATGAATTCTC CGGCGGCCTG CAGGACCTAT AACGTCTTGC TCTCTGAAGG GCGGCGGATT GCACTGGCGG CATTGCCGGT TTGA
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Protein sequence | MRLNEVVYSD ALPIDGYGPG FFRVGGEIKE GAMLTGAKGT SAWGGYEDAE PLLALAGEVD VLFIGTGAEI AHIPGALRQA LEAEGLGVEV MNSPAACRTY NVLLSEGRRI ALAALPV
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