| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0982 |
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| Symbol | |
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| ID | 4078144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1050017 |
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| End bp | 1050601 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006285 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_612977 |
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| Protein GI | 99080823 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA GCAGCCCCCA ACAGAGAAAC GCAGAATCAA CACGAAAGCG CATTCTTGCG
GCGGCGCAGC GGCGTTTTTC CAAACAGAGT TTTGATGCCA CAGGGATGCG CGAAATCGCG
GCAGAGGCAG GCGTCAACGT GGCGCTGGTG AACCGGTACT TCGGCTCCAA AGAGCAGTTG
TTCGAGGAGG CGGTTGTAGA GGCGATTACC ATTGACGCCT TGCTGGCGGG CCCGCAGGAC
GGCTTTGGCA GGCGAACGGC ATCCGCCATG CTTTCAAAAG ATTTCAAATA TATAGACCTT
GACCCCACTG CAGCATTTGT AAACTCTCTG GGCAGCCCGG TTGTCGGCGA GCGTCTACGA
CGCGCCGTAG AAGAACGGCT CTTGCCTGAA ATCTCCGGCT GGCTTGGAGG GGCACATGCG
GATCAACGCG CTGCAATGAT CTTCAGCGCC CTTTTGGGGT TTGATGTGCT GCGCCGCATG
GCCAGGATCG ATGCCCTCAA TACGCGCCAT GGCCCCGTGC TCGAGGATCT CTGCGCCGCG
ACCCTGCAGA GTTACGTGGA TGGCGCCCCG GACACAGAGG ATTAG
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| Protein sequence | MSESSPQQRN AESTRKRILA AAQRRFSKQS FDATGMREIA AEAGVNVALV NRYFGSKEQL
FEEAVVEAIT IDALLAGPQD GFGRRTASAM LSKDFKYIDL DPTAAFVNSL GSPVVGERLR
RAVEERLLPE ISGWLGGAHA DQRAAMIFSA LLGFDVLRRM ARIDALNTRH GPVLEDLCAA
TLQSYVDGAP DTED
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