| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0972 |
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| Symbol | |
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| ID | 4077268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1040768 |
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| End bp | 1041337 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006275 |
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| Product | sarcosine oxidase, gamma subunit |
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| Protein accession | YP_612967 |
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| Protein GI | 99080813 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4583] Sarcosine oxidase gamma subunit |
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| TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAG CTGTAAGTGC CATGAATGGG GCCAGTTTTG CGGGTCTGGC AAAGGTCGAG
GAAACGGGTC TGGGGGGCAT GATCACCCTG CGCGGCGACT TTGCCTCTGC TGCGTTCAAA
GCTGCCGTCA AAACGGCGAT TGGATGTGAC GTGCCTGCCG TGCGCAAGAT CGCCTTTGGC
GAACAGGGCG CGGCGGCCTG GATGTCCCCG GACGAGTTGT TGCTGCTGGT CGACTACGAC
ACTGCAGAAG CCGTGGTAGC ACAGTTGAGC GACGCATTGG CGGGCGAGCA CCATATGGCG
GTGAACGTGT CCGATGCGCG GGCGTGTTTC GCCGTGAGCG GTGAGGGCGC GCGCGAGGTG
ATCGCCAAGG TGGCACCGGT GGATCTGGAC GCGGGTCAGT TCGAGGCCGG AGATTTCCGT
CGCACCCGCT TTGCACAGGT GGCGGGGGCC TTCTGGCGCG ATGAGGCAGA TGTCTTCCAC
ATCGTCTGTT TCCGCTCTGT TGCGGTCTAT ATGTTCAACC TCCTCAGCAC CGCAGCGCAT
CCCCAGTCGA AGGTCGGCGT CTACGCCTGA
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| Protein sequence | MSKAVSAMNG ASFAGLAKVE ETGLGGMITL RGDFASAAFK AAVKTAIGCD VPAVRKIAFG
EQGAAAWMSP DELLLLVDYD TAEAVVAQLS DALAGEHHMA VNVSDARACF AVSGEGAREV
IAKVAPVDLD AGQFEAGDFR RTRFAQVAGA FWRDEADVFH IVCFRSVAVY MFNLLSTAAH
PQSKVGVYA
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