| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0969 |
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| Symbol | |
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| ID | 4077265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1035985 |
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| End bp | 1037280 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006272 |
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| Product | sarcosine oxidase beta subunit family protein |
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| Protein accession | YP_612964 |
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| Protein GI | 99080810 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCCC GGTCATATCT TGAGGCCAGA CACGAAGCAT TGGATTCGCT CATGAAACGC
TATTCAGCCT TTGCAGTGGC GCGGGAAGGC CTTCGCTACC ACAGCGGATG GGAACGCGCC
TGGCGCTCCC CGGAACCCAA ACGTCACTAT GACGTCATCA TCGTAGGCGC GGGTGGCCAT
GGGCTCGCTA CGGCCTATTA CCTTGGGAAA AACTTTGGCA TCACCAATGT TGCGGTGATC
GAAAAGGGTT GGCTGGGGGG CGGCAATACG GGCCGCAACA CCACCATCAT CCGTTCGAAC
TACCTGCAGG ATCCCTCTGC CGCGATCTAC GAGAAATCGC GCAGCCTCTA TGAGGATCTG
TCGCAGGACT TCAACTACAA CATCATGTTC AGCCCGCGCG GCGTGATCAT GCTGGCGCAG
ACCGAGCACG AGGTGCGTGG TTACAAGCGC ACCGCCCATG CCAATGCGCT CCAGGGCGTG
TCGACCGAAT GGATCGAACC CGCCCGCGTG AAGGAACTGG TGCCGATCAT CAACCTCGAA
GGTCCGCGCT ATCCGGTCCT TGGCGGGCTC TGGCAAGCGC GTGGCGGTAC CGCCCGTCAC
GATGCGGTGG CCTGGGGCTA TGCGCGGGCC TGCTCGGCGA TGGGCATGGA CATCATCCAG
AAATGCGAAG TCACCAATGT TCGGACTGAA AACGGCCGCG TGGTAGGTGT CGACACCACC
AAAGGGGCGA TCGACTGCGA CAAGCTGGGC ATGGTGGTTG CGGGCAACTG TTCGGTGCTG
TCTGAAATGG CGGGCTTCCG TCTGCCGGTG GAATCGGTGG CGCTGCAGGC GCTGGTCTCC
GAGCCGATCA AACCCTGCAT GGACGTGGTC GTGATGGCCA ACACCGTGCA TGGCTACATG
TCGCAATCCG ACAAGGGCGA GATGGTCATT GGTGGCGGCA CCGACGGCTA CAACAACTAC
ACCCAGCGCG GTTCTTTCCA CCACATCGAG GAAACCGTGC GCGCCCTCAA CGAGACTTTC
CCGATGGTGT CGCGCCTCAA GATGCTGCGC CAATGGGGTG GGATCGTGGA TGTAACCGGC
GACCGCTCGC CGCTGATTTC CAAAACGCCG GTTCAGAACT GTTTTGTCAA CGCTGGCTGG
GGCACCGGCG GCTTCAAGGC GATCCCCGGC TCGGGCTGGG CGATGGCGGA ACTGATGGCG
ACAGGGCATT CCAACCTCGC GGAAGAGTTC TCCATGATGC GCTTCAAAGA AGGCAAATTC
ATCGACGAGA GCGTCGCAGC AGGGGTGGCA CACTGA
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| Protein sequence | MRSRSYLEAR HEALDSLMKR YSAFAVAREG LRYHSGWERA WRSPEPKRHY DVIIVGAGGH
GLATAYYLGK NFGITNVAVI EKGWLGGGNT GRNTTIIRSN YLQDPSAAIY EKSRSLYEDL
SQDFNYNIMF SPRGVIMLAQ TEHEVRGYKR TAHANALQGV STEWIEPARV KELVPIINLE
GPRYPVLGGL WQARGGTARH DAVAWGYARA CSAMGMDIIQ KCEVTNVRTE NGRVVGVDTT
KGAIDCDKLG MVVAGNCSVL SEMAGFRLPV ESVALQALVS EPIKPCMDVV VMANTVHGYM
SQSDKGEMVI GGGTDGYNNY TQRGSFHHIE ETVRALNETF PMVSRLKMLR QWGGIVDVTG
DRSPLISKTP VQNCFVNAGW GTGGFKAIPG SGWAMAELMA TGHSNLAEEF SMMRFKEGKF
IDESVAAGVA H
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