| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0956 |
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| Symbol | |
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| ID | 4077350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1021740 |
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| End bp | 1022948 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638006259 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_612951 |
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| Protein GI | 99080797 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCC CAGCTCAGAC CCCGCCGATG TTGATGACAT TGGTCTTTGG CACCGCGTTG
TCGGTGCTCT CGCTCAATAT GTTCCTGCCC TCTCTGCCCG GCATCGCACA GGAGTTCGGC
GTGGACTACG GGCTCGCGAA CCTTGCGATT GCCGGCTATC TGACGATTTC CGCGGGGCTG
CAGCTCATTA TGGGGCCGAT GTCCGATCTC TACGGGCGCC GGAGGGTGAT GCTCCTGTGC
TGCGCGCTCT TTGTGCTCGC CTCCGTGGGC TGCGCGCTGG CCAGCAACAT CTGGGTGTTT
CTCGGCTTTC GCTTGCTGCA GGGCGCGATC ATCAGCGGGC AGGTGATTGC ACGTGCCGTG
ATCCGCGACA TGTACCCACC AAGCGAGGCG GCCAGCAAAC TCGGCTACAT GAGCATGATC
ATGGCGCTGG CGCCGATGAC AGGGCCGATG ATTGGGGGCG CGCTTGATAT GGCGTTTGGC
TGGCGCGCAG GGTTCTGGCT CTATTCCGGG CTTGGGTTGC TGGTGCTCTG GCTCACCTGG
GGCGACATGG GAGAGACCAA CACCAAGCGC GCGGCGACCT TTCGCGCGCA GATGCGGCTT
TATCCGCGTT TGTTCAGCTC GCGCCGCTTC TGGGGGTATT CGGCCTGCGT CGCCTTCTCT
ATCGGCGGGT TCTATTCCTT TGTGACCGGG GCGCCGATGG TCGCGGCGGC GTGGTTTGAT
CTGAGCCCGG CCATGGTGGG CCTTGGGATC GGGATTATCA CCTGCGGCTT CATGGTTGGC
AATTTTGTCA CCGGCCAGCT GGCACAGCGC CTGCGTTTGC TGACGCTTAT CCTGATCGGC
CGGGGGGTGG CCTGTCTTGG GCCGGCGGTG GGTCTTGCGC TGTTCTTCAT GGGGCAGGGG
AGCGAACTGG TGTTCTTTGG GTCCGCCATC TGCGTGGGCT TTGGCAACGG GCTGACGATC
GCAAATGCCA GTGCCGGGCT GATGTCGGTA CGCCCCGAGC TTGCCGGCAG TGCCGCAGGG
CTTTCGGGGG CGCTAAGCGT GGCGCTGGGC GCACTCCTCA CGGCTGTCAC CGGTGTGGCC
GTTGAACCCG AAACCGCGCC GTTTGCAGTG CTCGGCATCA TGTTGAGCGC AAGTGTGCTG
GCGCTTGTGT CGGCACTCTA TGTGTTGGTT GTAGACCTGC AGGATCCGCT GGAACCCGCG
CATGGGTGA
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| Protein sequence | MLRPAQTPPM LMTLVFGTAL SVLSLNMFLP SLPGIAQEFG VDYGLANLAI AGYLTISAGL
QLIMGPMSDL YGRRRVMLLC CALFVLASVG CALASNIWVF LGFRLLQGAI ISGQVIARAV
IRDMYPPSEA ASKLGYMSMI MALAPMTGPM IGGALDMAFG WRAGFWLYSG LGLLVLWLTW
GDMGETNTKR AATFRAQMRL YPRLFSSRRF WGYSACVAFS IGGFYSFVTG APMVAAAWFD
LSPAMVGLGI GIITCGFMVG NFVTGQLAQR LRLLTLILIG RGVACLGPAV GLALFFMGQG
SELVFFGSAI CVGFGNGLTI ANASAGLMSV RPELAGSAAG LSGALSVALG ALLTAVTGVA
VEPETAPFAV LGIMLSASVL ALVSALYVLV VDLQDPLEPA HG
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