| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0946 |
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| Symbol | |
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| ID | 4077340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1008573 |
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| End bp | 1009847 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006249 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_612941 |
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| Protein GI | 99080787 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.323241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.634482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAA ACCTAACCTT CCGCCAGATT TCGCTGGCCC TGATCAACTG GACCCGTCGC
GCGAGCTACG CAGCAGGTCT GGCGCTTGCC ATTGCCGCGG CTGCCCCGGC GGATCTTCAG
GCACAGGGGC TGTTCTCGCC CGCGATCACC GTCAACGAGG ATGTGATCAC CACCTATGAA
CTGGAGCAAC GTGCCCTTTT CCTGAGCGTT CTAGGCTCGG TGCAGGGCGA TCCGTTTGAA
ACCGCTCGCG ATGATCTGAT CGAGGATCGG CTCAAGCGTC AGGTCATGAA AGACGTGGGC
CTGACCCTCA GTGAAGAAGA AGTCACCGAA GGCATGCGCG AGCTTGCGCA GCGTGCCAAT
CTGACGCTCG AGGAGTTTCT CGCCAGCCTG AACCAGGCCG GTGTCGCCCC GGAAACCGTG
CGTGATTTCA CCACAGCAGG TCTTGGCTGG CGCGAGTATG TCCGCGGCCG GTTCCTGTCG
CAGGCCCGCC CCTCCGAAGC CGAAATTGAT CGTGCCATGG GCACCGCTGG CTCCGGCAGC
GTTCAGGTGC TGCTGTCTGA AATCATCCTT CCCCTCACGC AAGAAAACGC CGCACAGGTT
CAGGATCTTG CGATCCAGAT CTCCGAACTG ACCCGCGCCG AGGCCTTCGC CGCCTCCGCG
GCACAATTCT CTGCCGCCGA CAGCCGCACT GACGGCGGAC GCCTGCCGTG GATGTCGCTC
TCTCGCCTGC CTCCGCAGCT GCAAGAAGTG GTCCTCGGGC TGGAACCCGG CGAGATCACC
CAGCCCTTGC CCATGCAGGG TGCCATCGCG ATCTTCCGCA TGCGTGGTCT ACGCGAGGTG
GACGGGCGCA GCGCGACCTA CGCCGCGATT GATTACGCCA CCTACCGCAT CCCCGGTGGG
CGCAGCCCCG AGGCGCTTGC GCGCGCCACT GAAATCCGCG ACGAGATCGA CACCTGCGAT
GACCTCTATG GCATCAACAA AGGGCAAGAC CCCGATCGTC TGTTCCGCGG CAGCGAGGCC
CCCGGTGCAA TCCCACAGGA TATCGCGCTG GAACTCTCTC GCTTCGACGA GAATGAATCC
TCCGCGACGC TGACCCGTGA CAACGGCCAG ACGCTTCTGT TTGTGATGCT CTGCGGCCGC
ACCAGCGAAG TTGTCGCCTC GCAGGAAAAC GCCCGTGTCG CTGTGGCCAA CGCTCTTGTG
CAACAGCGCC TGAATGAACT CGCCGAGGCC CATGTCGAAC AGCTGAAGGC CAACGCCCGG
ATCGATTTCC AATGA
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| Protein sequence | MQQNLTFRQI SLALINWTRR ASYAAGLALA IAAAAPADLQ AQGLFSPAIT VNEDVITTYE
LEQRALFLSV LGSVQGDPFE TARDDLIEDR LKRQVMKDVG LTLSEEEVTE GMRELAQRAN
LTLEEFLASL NQAGVAPETV RDFTTAGLGW REYVRGRFLS QARPSEAEID RAMGTAGSGS
VQVLLSEIIL PLTQENAAQV QDLAIQISEL TRAEAFAASA AQFSAADSRT DGGRLPWMSL
SRLPPQLQEV VLGLEPGEIT QPLPMQGAIA IFRMRGLREV DGRSATYAAI DYATYRIPGG
RSPEALARAT EIRDEIDTCD DLYGINKGQD PDRLFRGSEA PGAIPQDIAL ELSRFDENES
SATLTRDNGQ TLLFVMLCGR TSEVVASQEN ARVAVANALV QQRLNELAEA HVEQLKANAR
IDFQ
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